Talks and guest seminars

Guest seminars

Advancing Healthcare with Natural Language Processing

Dr. Kfir Bar (RUNI) | December 18, 2024 | Abstract

Ultima Genomics UG100 and the era of ultra-large sequencing

Gilad Almogy, Founder and CEO, Ultima Genomics | July 3, 2024 | Abstract

Nephrology for non-nephrologists

Prof. Benaya Rozen Zvi and Dr. Dana Bielopolski, Rabin Medical Center, Beilinson Campus | June 5, 2024 | Abstract

Uncovering the regulatory function of variants that shaped human evolution

Dr. David Gokhman, Department of Molecular Genetics, WIS | May 15, 2024 | Abstract

Machine learning unveils insights into rules governing microRNA-target interactions

Dr. Isana Veksler-Lublinsky, Department of Software and Information Systems Engineering, BGU | March 27, 2024 | Abstract

Developing AI-Assisted Diagnosis Systems for Rare Diseases

Prof. Ting Chen, Department of Computer Science, Tsinghua University | March 20, 2024 | Abstract

Deep learning and generalization performance for unstructured medical data analysis

Dr. Joachim A. Behar, Faculty of Biomedical Engineering, Technion-IIT | March 6, 2024 | Abstract

Epigenomics of human disease

Dr. Yotam Drier, The Lautenberg Center for Immunology and Cancer Research, Faculty of Medicine, HUJI | February 21, 2024 | Abstract

Generative models for peptide design

Dr. Jérôme Tubiana, School of Computer Science, TAU | January 31, 2024 | Abstract

Robust identification of systematic genomic variation at the single-cell level

Dr. Elior Rahmani | December 28, 2022 | Abstract

Statistical challenges and methods for studying disease heterogeneity in epidemiologic research

Prof. Daniel Nevo | December 7, 2022 | Abstract

Multiomic data from 1148 chronic lymphocytic leukemia patients delineates their molecular map and its impact on outcome

Dr. Binyamin A. Knisbacher | September 7, 2022 | Abstract

Predicting molecular mechanisms of hereditary diseases by using their tissue-selective manifestation

Prof. Esti Yeger-Lotem | May 11, 2022 | Abstract

Mapping paths of tumor evolution with single cell phylogenetics

Prof. Nir Yosef | April 6, 2022 |

Spatial modeling of variants in complement genes associated with age-related macular degeneration

Dr. Michelle Grunin | January 19, 2022 |

Microbiota and cancer - an ecological journey

Dr. Ben Boursi | December 8, 2021 |

In sickness and in health – Roles of RNA modifications in human disease and across evolution

Dr. Aldema Sas-Chen | October 20, 2021 | Abstract

A tale of four tales and more

Prof. Eytan Ruppin, Chief, Cancer Data Science Lab, NCI, NIH | August 4, 2021 | Abstract

The Future of Predictive Medicine

Dr. Ben Y. Reis, Director, Predictive Medicine Group, Harvard Medical School | July 21, 2021 | Abstract

Research in the data-rich biomedical era to advance precision medicine

Prof. Dvir Aran, Faculty of Biology, the Taub Faculty of Computer Science (secondary appointment), and the Lorry I. Lokey Interdisciplinary Center for Life Sciences and Engineering, the Technion | December 23, 2020 | Abstract

How AI is transforming cancer diagnosis in live clinical setting

Dr. Chaim Linhart, Co-founder & CTO, Ibex Medical Analytics | September 9, 2020 | Abstract

Two PTSD subgroups identified by resting-state fMRI computational analysis

Dr. Adi Maron-Katz, Department of Psychiatry and Behavioral Sciences, School of Medicine, Stanford University | February 26, 2020 | Abstract

The evolution of aneuploidy in cancer models: Perils and opportunities

Dr. Uri Ben-David, Dept. of Human Molecular Genetics & Biochemistry, School of Medicine, TAU | January 8, 2020 | Abstract

Trapped between pathogens and autoimmunity: The evolution of the mammalian immune system

Dr. Tzachi Hagai, School of Molecular Cell Biology & Biotechnology, Life Sciences, TAU | December 18, 2019 | Abstract

The accelerated evolution of oncology treatment, real life practice

Dr. MD Ronen Brenner, Head of Oncology Institute, The Edith Wolfson Medical Center, Holon | January 23, 2019 |

Learning to act from observational health data

Dr. Uri Shalit, Statistics & Information Systems Engineering, Faculty of Industrial Engineering and Management, Technion. | October 17, 2018 | Abstract

Predictive Modeling in Stem Cell Transplantation: Lessons Learned and Future Challenges

Roni Shouval MD, PhD, Hematology Division, Talpiot Medical Leadership Program, Chaim Sheba Medical Center, Tel-HaShomer, Israel | July 25, 2018 | Abstract

Deep learning for protein-RNA interactions

Dr. Yaron Orenstein, Department of Electrical and Computer Engineering, Ben-Gurion University | May 2, 2018 | Abstract

Dynamic investigation of inflammation markers for early detection of cytokine storm

Prof. MD. Shlomo Berliner, Head of the Dept. of Internal Medicine at the Tel Aviv Sourasky Medical Center, Ichilov | November 1, 2017 | Abstract

Big Data in Health Care - a Game Changer

Prof. MD. Varda Shalev, Director, Institute for Health, Research & Innovations, Maccabi Healthcare Services | October 25, 2017 | Abstract

Mapping and Modeling of Microbial Cellular Networks

Prof. James Galagan, Departments of Biomedical Engineering and Microbiology; National Emerging Infectious Diseases Laboratory, Boston University. | July 19, 2017 | Abstract

Detecting transcript fusions for transcriptome diagnostics

Lior Pachter | April 5, 2017 | Abstract

Genetic Media

Yaniv Erlich | December 21, 2016 | Abstract

Data-driven innovation in healthcare

Ran Balicer | December 14, 2016 | Abstract

Genetic and Epigenetic Determinants of Leukemia Evolution

Dan Landau | November 9, 2016 | Abstract

Algorithms for finding significant combinations of mutations in cancer

Fabio Vandin | July 27, 2016 | Abstract

Elucidating Compound Mechanism of Action by Network Dysregulation Analysis in Perturbed Cells

Yishai Shimoni | February 11, 2015 | Abstract

Studying tissue heterogeneity by measuring single-cell gene expression

Effi Kenigsberg | January 21, 2015 | Abstract

From 1D to 3D and back: Explaining and exploiting genome structure

Noam Kaplan | January 7, 2015 | Abstract

Reconstructing Breakage Fusion Bridge architectures using noisy copy numbers

Shay Zakov | March 12, 2014 | Abstract

Cohesin stabilizes interphase chromosomal architecture

Eitan Yaffe | March 20, 2013 | Abstract

RNA-mediated transgenerational inheritance of acquired traits

Oded Rechavi | January 2, 2013 | Abstract

Computational methods of characterizing molecular aberrations on cancer genomes and optimizing treatment outcomes

Chen-Hsiang Yeang | September 3, 2012 | Abstract

Long intervening noncoding RNAs: genomics, evolution and functions in embryonic development

Igor Ulitsky | June 27, 2012 | Abstract

Judith Berman | May 2, 2012 |

Reconstructing Boolean Models of Signaling

Roded Sharan | April 18, 2012 | Abstract

Using Individual Human Genomes to Illuminate the Mysteries of Early Human History

Ilan Gronau | December 21, 2011 | Abstract

Tzachi Pilpel | December 7, 2011 |

Candidate gene prioritization by genomic data fusion

Yves Moreau | June 1, 2011 | Abstract

Uncovering the human cell lineage tree in health and disease: the next grand scientific challenge

Ehud Shapiro | May 5, 2011 | Abstract

Understanding miRNA roles in breast cancer through enrichment networks

Israel Steinfeld | March 16, 2011 | Abstract

A network biology approach to decipher cellular response pathways

Esti Yeger Lotem | February 23, 2011 | Abstract

In vivo transcription factor - target recognition: What can we learn from ChIP-Seq data?

Philipp Bucher | January 25, 2011 | Abstract

An introduction to the personal methylome

Lior Pachter | December 22, 2010 | Abstract

ChemSpaceScanner: A platform for virtual screening of HUGE chemical libraries at high resolution

Rakefet Rosenfeld | October 27, 2010 | Abstract

Annelyse Thevenin (Paris-Sud University) | June 9, 2010 |

Rolf Backofen (University of Freiburg) | May 4, 2010 |

Pierre Baldi (UC Irvine) | March 1, 2010 | Abstract

Finding interesting patterns in microarray data

Li Teng (Chinese University of HK) | January 26, 2010 | Abstract

Accurate estimation of expression levels of homologous genes in RNA-seq experiments

Eran Halperin | January 20, 2010 | Abstract

On the Roles of Computer Science in Systems Biology

Oded Maler | December 23, 2009 | Abstract

Leveraging genetic variability across populations for the identi.cation of causal variants

Noah Zaitlen | December 16, 2009 | Abstract

Some old and new ideas on efficient seeding for biosequence search

Grgory Kucherov (CNRS LIlle) | December 9, 2009 | Abstract

Finding function in ÔJunk DNAÕ

Nadav Ahituv (UCSF) | December 2, 2009 | Abstract

Utilizing metagenomic data for the study of genes and gene cassettes

Itay Sharon (Technion) | November 25, 2009 | Abstract

Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing

Moran Yassour (HUJI) | November 18, 2009 | Abstract

The intertwined evolutionary histories of marine Synechococcus and Prochlorococcus

J. Peter Gogarten (University of Connecticut) | November 11, 2009 | Abstract

Pavel Pevzner (UCSD) | October 29, 2009 |

A universal adaptive translation efficiency profile of proteins

Tzachi Pilpel (WIS) | October 21, 2009 | Abstract

Report on International Summer School and Workshop 2009 on Regulatory (Epi-)Genomics

Esther Lou Pass | October 14, 2009 | Abstract

How cells decide on their fate? (OR: Challenges in single cell imaging informatics)

Iftach Nachman | September 30, 2009 | Abstract

In silico methods for genome rearrangement analysis: from identification of common markers to ancestral reconstruction

Graldine Jean (Bordeaux) | August 12, 2009 | Abstract

Reconstructing Phylogenies from Noisy Metrics

Ilan Gronau (Technion) | July 8, 2009 | Abstract

Methods for the analysis of human genetic variation

Eran Halperin | June 17, 2009 | Abstract

Gene regulation by microRNAs

Noam Shomron | June 10, 2009 | Abstract

Amos Tanay (WIS) | June 3, 2009 |

The Pivotal Role of Cellular Stress in Shaping Genetic Interaction Maps

Ariel Jaimovich (HUJI) | May 27, 2009 | Abstract

Polynomial time algorithms for clustering and image segmentation problems

Dorit Hochbaum (Berkeley) | March 25, 2009 | Abstract

Genetics with a Twist - Novel Methods for Characterizing Proteins Required for Folding in the Secretory Pathway

Maya Schuldiner (WIS) | February 25, 2009 | Abstract

A universal relationship between gene compactness and expression levels in multicellular eukaryotes

Liran Carmel (HUJI) | February 4, 2009 | Abstract

Dynamic Analysis of Molecular Networks

Gal Chechik (Google) | January 21, 2009 | Abstract

Inferring Whole Genome Methylation Status using High-Throughput Sequencing Data

Meromit Schuster (Berkeley) | January 7, 2009 | Abstract

Elad Ziv (UCSF) | December 31, 2008 |

Microbial transcriptome analysis with next generation sequencing

Rotem Sorek (WIS) | December 10, 2008 | Abstract

Do Cells Play Dice? Stochasticity and Regulation in Gene Expression

Nir Friedman (Weizmann) | June 18, 2008 | Abstract

Translational Control: Non-Coding RNAs and Alternative Splicing

Rolf Backofen (University of Freiburg) | May 28, 2008 | Abstract

Amos Tanay | April 9, 2008 |

The Genographic Project: Background and Some Statistical Challenges

Saharon Rosset (TAU) | March 26, 2008 | Abstract

CFinder: Efficient module finder in directed, undirected and weighted networks

Illes Farkas (Eotvos University) | March 5, 2008 | Abstract

Limor Broday (TAU) | February 27, 2008 |

Conference report: 2007 RECOMB regulatory genomics satellite

Daniela Raijman (Google) | February 6, 2008 | Abstract

Identifying genes whose regulation evolves under natural selection in primates

Ran Blekhman (University of Chicago) | January 23, 2008 | Abstract

The making of a molecular time bomb: How does Huntington know when to strike?

Shai Kaplan (Weizmann) | January 16, 2008 | Abstract

Horizons in microbial genomics

Rotem Sorek (Berkeley) | January 2, 2008 | Abstract

Haplotypes in the Germline and in the Soma: Ancestral IBD Segments and Tumor Amplification

Itsik PeÕer (Columbia University) | December 31, 2007 | Abstract

Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution

Tal Dagan (Heinrich-Heine Universitaet Duesseldorf) | December 26, 2007 | Abstract

Algorithms for Gene Finding, Network Alignment, and Ancestral Population Inference

Serafim Batzoglou (Stanford) | December 20, 2007 | Abstract

A Modular Approach for Integrative Analysis of Large-scale Gene-expression and Drug-response Data

Sven Bergmann (University of Lausanne) | November 21, 2007 | Abstract

Optimal Solutions for Hard Network Problems in Bioinformatics

Falk Hueffner (TAU + Friedrich-Schiller university of Jena) | October 31, 2007 | Abstract

Molecular and structural basis for the organization of protein networks

Yanay Ofran (Columbia University) | October 17, 2007 | Abstract

Global and Local Architecture of the Mammalian microRNA-Transcription Factor Regulatory Network

Reut Shalgi (Weizmann) | October 10, 2007 | Abstract

Evaluation of Gene Expressions Clusters via Information Theoretic Measure

Irad Ben-Gal (TAU) | August 1, 2007 | Abstract

Outcome prediction in breast cancer: Machine Learning vs Biology

Eytan Domany (Weizmann) | June 27, 2007 | Abstract

Tree scanning: a tool for studying the genetic architecture of complex traits

Alan Templeton (Washington University) | May 30, 2007 | Abstract

Richard Karp (Berkeley) | May 16, 2007 |

Finding Informative Regulatory Elements

Noam Slonim (IBM Research) | March 14, 2007 | Abstract

Integrative analysis of diverse large-scale data sets for Hepatitis C disease

Benno Schwikowski (Pasteur Institute) | February 28, 2007 | Abstract

RNAspa: A Breadth-First Search Algorithm to Simultaneously Align and Predict the Secondary Structure of ncRNA Molecules

Yair Horesh (Bar Ilan) | February 14, 2007 | Abstract

Seeds for Homology Search in DNA: Indel Seeds and Parameter Free Calculation of Sensitivity

Gary Benson (Boston University) | January 17, 2007 | Abstract

On the association between domain-domain interactions and protein-protein interactions

Hanah Margalit (HUJI) | January 10, 2007 | Abstract

Inferring Phylogenies via LCA-distances

Ilan Gronau (Technion) | December 27, 2006 | Abstract

Rotem Sorek (Berkeley) | December 20, 2006 |

Yoav Gilad (University of Chicago) | December 14, 2006 |

Lateral gene transfer in microbial evolution

Uri Gophna (TAU) | November 1, 2006 | Abstract

Computational Design of RNA Switches

Danny Barash (BGU) | September 6, 2006 | Abstract

The quest for viral ÔphotosynthesisÕ using both metagenomics and environmental genomics

Oded Beja (Technion) | August 16, 2006 | Abstract

Canalization of development by miRNAs

Eran Hornstein (Weizmann) | August 9, 2006 | Abstract

We resemble prokaryotes much more than we would like to admit

Yuval Tabach (Weizmann) | July 5, 2006 | Abstract

Gene recruitment and adaptive reprogramming of genetic regulatory networks

Erez Braun (Technion) | June 28, 2006 | Abstract

Avi Orr-Urtreger (Ichilov) | May 31, 2006 |

A Probabilistic Model for the Survivability of Cells

Ilan Adler (Berkeley) | May 16, 2006 | Abstract

A Genomic Code for Nucleosome Positioning and Chromosome Function

Eran Segal (Weizmann) | April 26, 2006 | Abstract

A New Approach to Protein Identification

Dekel Tsur (Ben Gurion Univ) | March 29, 2006 | Abstract

The Biozon system for complex analysis of heterogeneous interrelated biological data and discovery of emergent structures

Golan Yona (Technion) | March 22, 2006 | Abstract

A novel inside-out prostanoid signaling pathway that mediates GnRH receptor auto-regulation and LH release

Zvi Naor | March 8, 2006 | Abstract

An Algebraic Model for Sorting by Transpositions

Tzvika Hartman (Bar Ilan) | March 1, 2006 | Abstract

EVEREST: Automatic Identification and Classification of Protein Domains in All Protein Sequences

Elon Portugaly (HUJI) | January 25, 2006 | Abstract

Data, technology and populations for genomewide association studies

Itsik PeÕer (Broad Institute) | January 18, 2006 | Abstract

Structural Approximations for Genetic Analysis

Ydo Wexler (Technion) | January 11, 2006 | Abstract

Elucidating function and organization of molecular networks: From Molecules to a System

Dana PeÕer (Harvard Medical School) | January 4, 2006 | Abstract

Information theoretic analysis of biological data

Noam Slonim (Princeton) | December 28, 2005 | Abstract

Using expectation-maximization to infer the early evolution of spliceosomal introns

Liran Carmel (NCBI) | November 9, 2005 | Abstract

Reliable protein function prediction by Bayesian phylogenomics

Steve Brenner (Berkeley) | November 2, 2005 | Abstract

Swimming in GOBS of Data

Eugene Kolker (Biatech) | October 30, 2005 | Abstract

Biological context networks: viewing biology via multiple functionalities and milieux

Simon Kasif (Boston U.) | August 17, 2005 | Abstract

A Sub-quadratic Sequence Alignment Algorithm for Unrestricted Scoring Matrices

Michal Ukelson (Technion) | July 27, 2005 | Abstract

Contemporary issues in docking and scoring, implication on G protein coupled receptor drug discovery

Yael Marantz (Predix Pharmaceuticals) | June 29, 2005 | Abstract

Regulation of Amino-Acid Polymorphism by Alternative Splicing

Yael Mandel-Gutfreund (U. Haifa) | June 22, 2005 | Abstract

Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks

Jacob Scott (UC Berkeley) | June 8, 2005 | Abstract

David Sankoff (U. Ottawa) | May 23, 2005 |

Probabilistic evolutionary models and (a few of) their applications

Tal Pupko (TAU Cell Research and Immunology) | April 20, 2005 | Abstract

Maximum Likelihood of Evolutionary Trees is Hard

Tamir Tuller | April 13, 2005 | Abstract

Proteins associated with cancer occupy central positions in the protein-interaction network

Nir Ben-Tal (TAU Biochemistry) | March 30, 2005 | Abstract

Trying to make sense out of the COP9 signalosome

Danny Chamovitz (TAU Botany) | March 23, 2005 | Abstract

Approximation Schemes for Clustering Problems

Yuva Rabani (Technion) | March 16, 2005 | Abstract

Phenotypic variability in the response to antibiotic

Nathalie Questembert-Balaban (U. Jerusalem) | February 23, 2005 | Abstract

Recent advances in FDR methodology

Daniel Yekutieli (TAU Statistics) | February 2, 2005 | Abstract

Approximation Algorithms for Sorting by Transpositions Problems

Tzvika Hartman (Weizmann) | January 19, 2005 | Abstract

Using Microarrays to Microdissect Cancer Genomes

Zohar Yakhini (Technion) | January 12, 2005 | Abstract

A Tale of three Tales

Eitan Rupin | January 5, 2005 | Abstract

From Sequence to Expression

Eran Segal (Stanford) | December 31, 2004 |

Probabilistic Inference of Alternative Splicing Events in Microarray Data

Ofer Shai (U. Toronto) | December 29, 2004 | Abstract

Modular epistasis in yeast metabolism

Daniel Segre (Harvard) | December 15, 2004 | Abstract

Algorithmic approaches for analyzing genetic networks

Roded Sharan (Berkeley) | December 10, 2004 |

Yoel Kloog (TAU Neurobiochemsitry) | December 8, 2004 |

Natural Antisense Transcription is Widespread and Conserved in Mammals

Dvir Dahari (compegen) | December 3, 2004 |

Modeling Dependencies in Protein-DNA Binding Sites

Yoseph Barash (HUJI) | November 19, 2004 |

Genome-wide screening for RNA editing sites

Erez Levanon (Compugen) | November 17, 2004 | Abstract

Ultra-Conservation in the Human Genome

Gil Bejerano (UCSC) | November 10, 2004 | Abstract

Feature selection finds new features relevant for alternative splicing

Gideon Dror (Tel Aviv College) | October 20, 2004 | Abstract

Towards whole genome association studies

Itsik PeÕer (Whitehead Institute, MIT) | July 21, 2004 | Abstract

Approximate Labelled Subtree Homeomorphism and its Application to Metabolic Pathways Analysis

Oleg Rokhlenko (Technion) | July 14, 2004 | Abstract

Linear Separability and Classifiability of Gene Expression Datasets

Giora Unger | June 30, 2004 | Abstract

Global and specific exploration of protein synthesis mechanisms in yeast.

Yoav Arava | June 9, 2004 | Abstract

Convex Recoloring of Strings and Trees

Sagi Snir | May 19, 2004 | Abstract

Ontogenetic footprint dominates tissue gene expression

Itai Yanai | May 12, 2004 | Abstract

The multiple functions of Pax6 in eye development

Ruth Ashery-Padan | April 28, 2004 | Abstract

From heterogeneous data to regulatory model: a probabilistic approach.

Daphne Koller | April 21, 2004 | Abstract

Adaptation in a genetic switch

Naama Brenner | April 14, 2004 | Abstract

MEX, a novel motif extraction algorithm, and its application to the promoter regions of S. Cerevisiae.

David Horn | March 17, 2004 | Abstract

Did you know that Multiple Alignment is NP-hard?

Isaac Elias | March 10, 2004 | Abstract

Making sense (rather than antisense..) out of multi-knockout experiments

Alon Kaufman | March 3, 2004 | Abstract

Breast cancer risk: the role of germline mutations in BRCA1/BRCA2 and other genes in familial and sporadic cases

Eytan Friedman (Sheba medical center) | January 21, 2004 |

De novo Repeat Classification, Multiple Alignment, and Fragment Assembly

Pavel Pevzner | January 15, 2004 | Abstract

Analysis of Gene Expression Data: Applications to Studies of Cancer, Differentiation and Stem Cells

Eytan Domani (WIS) | January 14, 2004 |

Preferential Attachment in the Protein Network Evolution

Eli Eisenberg (Compugen) | January 7, 2004 |

Evolution of spliceosomal introns: insights from comparative genomics

Eugene V. Koonin | January 1, 2004 | Abstract

Module Networks: Reconstruction of regulatory moudles and their control programs from gene expression data

Dana PeÕer (HUJI) | December 25, 2003 |

Spectral Clustering of Proteins

Ori Sasson (HUJI) | December 18, 2003 |

Finding Regulatory Patterns in Bacterial Genomes

Eleazer Eskin | December 4, 2003 |

Computational Problems in Genetic Linkage Analysis

Dan Geiger (Technion) | November 27, 2003 |

Resolution of Haplotypes and Haplotype Frequencies from SNP Genotypes of Pooled Samples

Itsik PeÕer (WIS) | November 13, 2003 |

Restricting SBH Ambiguity via Restriction Enzymes

Sagi Snir (Technion) | September 4, 2003 |

Assembling puzzles by breaking them into smaller pieces

Pavel Pevzner (UC San Diego) | June 3, 2003 |

Motifs and regulation

Marie-France Sagot (INRIA) | June 1, 2003 |

Structural Bioinformatics Algorithms and Computer Assisted Drug Design

Haim Wolfson | April 30, 2003 |

Designing Optimally Multiplexed SNP Genotyping Assays

Yonatan Aumann (Bar Ilan U) | April 2, 2003 |

Computational dissections of cellular regulatory networksÊ

Tzachi Pilpel (WIS) | March 26, 2003 |

Genomic Sorting with Length-Weighted Reversals

Ron Pinter (Technion) | March 5, 2003 |

Analyzing time series expression data: From individual gene expression to genetic regulatory networks

Ziv Bar Yoseph (MIT) | January 15, 2003 |

Large Scale Recovery of Haplotypes from Genotype Data using Imperfect Phylogeny

Eran Halperin (Berkeley) | January 2, 2003 |

Cell Cycle Control through Splicing

Martin Kupiec | December 24, 2002 |

Large Deviations for Optimal Local Sequence Alignments

Benny Yakir (HUJI) | December 17, 2002 |

The Society of Genes: Networks of Functional Links between Genes by Comparative Genomic

Itai Yanai, WIS | August 14, 2002 |

Network motifs in the transcriptional regulation network of Escherichia coli

Uri Alon (WIS) | May 8, 2002 |

Denaturing High Performance Liquid Chromatography (DHPLC) and Diagnosis of DNA Alterations

Dani Bercovich (Migal) | April 24, 2002 |

Discovering Local Structure in Gene Expression Data: The Order-Preserving Submatrix Problem

Benny Chor | April 10, 2002 |

Revealing Modular Organization in the Yeast Transcriptional Program

Jan Ihmels (WIS) | March 20, 2002 |

Using Graphical Probabilistic Models to Understand Gene Expression

Nir Friedman (HUJI) | March 6, 2002 |

Uri Keich (USC) | February 1, 2002 |

Four Taxon ML Forks under Molecular Clock: Analytic Solutions

Sagi Snir (Technion) | January 28, 2002 |

On the Complexity of Flexible Approximation Problems

Adi Akavia | January 21, 2002 |

Recognition of Interval Graphs, Interval Probe Graphs, and Circular-arc Graphs

Ross McConnel (Colorado) | November 30, 2001 |

Exploiting Redundancy in the Genetic CodeÊ

Steve Skiena (Stony Brook) | November 21, 2001 |

Analytic Solutions for Three Taxon MLMC Trees with Variable Rates Across SitesÊ

Benny Chor (Technion) | August 23, 2001 |

Bayesian Netowrks DayÊ

Dana PeÕer (HUJI) | August 8, 2001 |

Sequences that regulate al[u]ternative splicingÊ

Eran Segal (Stanford) | July 18, 2001 |

Rich Probabilistic Models for Gene ExpressionÊ

Dana PeÕer (HUJI) | July 12, 2001 |

Inferring Subnetworks from Perturbed Expression ProfilesÊ

Ann Bergeron (Univ. du Guebec a Montreal) | July 6, 2001 |

Analysis of Synthesis Design ProblemÊ

Zohar Yakhini (Agilent) | June 13, 2001 |

Overabundance Analysis with Applications in Cancer Sub-classificationÊ

Maxim Shatsky | June 6, 2001 |

The human genome project / protein interactions

Jaqui Beckman | May 9, 2001 |

Scaling Law in Sizes of Protein Sequence FamiliesScaling Law in Sizes of Protein Sequence FamiliesÊ

Ron Unger (BIU) | April 28, 2001 |

Theoretical aspects of disease susceptibility gene discoveryÊ

Ariel Darvasi (HUJI) | April 21, 2001 |

Tissue Classification with Gene Expression ProfilesÊ

Iftach Nachman (HUJI) | March 14, 2001 |

An Information Theoretic Model for Genomic EvolutionÊ

Gill Bejeran (HUJI) | March 7, 2001 |

Conserved evolution of mRNA splicing between group II autocatalytic introns and spliceosomal introns

Gil Ast (TAU) | February 14, 2001 |

Reconstruction of Chromosomal Site Origin Based on Adjacent Haplotypes

Michael Korostishevsky (TAU) | January 31, 2001 |

On the Common Substring Alignment Problem

Michal Ziv-Ukelson (Haifa) | January 17, 2001 |

Identification of the gene causing mucolipidosis type IV

Nili Avidan (Weizmann) | January 10, 2001 |

Maximum Weight Hypertrees and Windmill Farms

Nati Srebro (MIT) | December 20, 2000 |

Brute force minimization in an antlion(*) town: The generation of decoy sets for proteins

Chen Kaesar (Weizmann) | December 13, 2000 |

microarray experiments produce only gene lists? Lessons from the use of oligonucleotide microarrays to analyze pulmonary fibrosis in mice and humans.

Naftali Kaminski (Sheba Hospital) | December 6, 2000 |