Posts by Gilit

Congratulations to David Pellow for the publication of the SCAPP algorithm. SCAPP, developed jointly with I. Mizrahi’s group, is a new tool for extraction and assembly of plasmids from metagenomic samples.  

The paper , by Yael Ben-Ari and colleagues, on utilizing universal hitting sets in the MSP algorithm, has been accepted to the ACM-BCB conference.  

Papers by Omer, Nimrod, David, Hagai and Dan Coster were accepted to ISMB/ECCB 2021. All will be presented as posters, and the first four in talks as well. See here for the details. Congratulations!

Congratulations to Dan Coster who won The Celia and Marcus Maus Prize for MSc students in Computer Science, for the academic year 2020-2021.

Congratulations to Nimrod Rappoport who won the Dan David Scholarship in molecular medicine.

Omer and Dan’s study on predicting deterioration in COVID-19 patients was accepted to the ICLR 2021 Workshop: Machine Learning for Preventing and Combating Pandemics. The study is a collaboration with Maya from the group and the clinical partners I. Attar, S. Shenhar-Tsafraty, S. Berliner, G. Rahav and O. Rogowski.

Congratulations to Dan Coster who was awarded a prize of the Cancer Biology Research Center (CBRC) at TAU. The Grants Committee of CBRC selected Dan’s cancer prediction lecture as an outstanding research project, among projects presented at the CBRC virtual meeting series in the 2020 winter semester.

Read Dvir’s paper revealing a new classification of melanomas into prognostic subgroups, which can be implemented using a very simple decision tree.    

Read Hagai’s paper in Molecular Systems Biology on a new active module identification algorithm, including an extensive benchmark of leading algorithms for the task, and novel evaluation criteria.  

Read Dan Coster’s manuscript showing improved prediction of future breast and prostate cancer risk based on EMR data from routine checkups of healthy individuals.