Table of Contents

• Introduction
• Starting EXPANDER
• Input Data
• Preprocessing GE Data
• Viewing Data Plots
• Clustering GE Data
• Biclustering GE Data
• Network Based Grouping of GE Data
• Group Analysis Tools
• Matrix Visualizations (Heat maps)
• Hierarchical Clustering and Visualization
• PCA Transformation
• Additional Options
• File Formats
• Sample Input Files
• Supplied Files
• Settings
• R External Application
• FAQ
• Copyrights Information
• References