Module number 80




Database revision : gnsdb28.10
Date : Tue Feb 25 17:40:17 2003
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Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond458:YP_raffinose_vs_reference_pool_car-2\n Cond448:galactose_vs._reference_pool_car-1\n Cond316:37C_to_25C_shock_-_30_min\n Cond462:25_deg_growth_ct-1\n mYJL160C:Unknown ,, Unknown\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n mSPO69:Required for sporulation; highly induced during sporulation.\n,S. pombe REC8 homolog,Null mutant is viable, does not under\ngo meiotic division and is unable to sporulate. The null mut\nant also exhibits a loss of sister chromatid cohesion, an ab\nsence of the synaptonemal complex, and chaotic chromosome se\ngregation.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond406:diauxic_shift_timecourse_9.5_h\n Cond363:dtt_015_min_dtt-2\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond315:37C_to_25C_shock_-_15_min\n Cond331:29C_+1M_sorbitol_to_33C_+_1M_sorbitol_-_30_minutes\n Cond467:steady_state_21_dec_C_ct-2\n Cond729:sin3\n Cond573:cdc15_80\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond124:rad6(haploid)\n Cond386:Hypo-osmotic_shock_-_30_min\n Cond364:dtt_030_min__dtt-2\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond384:Hypo-osmotic_shock_-_5_min\n Cond30:clb6\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mMPC54:Meiotic Plaque Component,,Null: viable. Other phenotypes: sp\norulation deficient.\n mSPS4:sporulation-specific protein,,normal sporulation\n Cond940:6h\n Cond:\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond916:(99i5)__HBY4_YPGL+G_NormInt\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond948:W303_ume6_YPA_\n mRNP1:ribonucleoprotein 1,RNA binding protein (putative),Null muta\nnt is viable\n Cond937:t=0\n Cond934:8h\n mYOL085C:Unknown ,, Unknown\n Cond961:t7_g/r_ratio\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n mYLR445W:Unknown ,, Unknown\n mGAL7:galactose-1-phosphate uridyl transferase,galactose-1-phospha\nte uridyl transferase,Null mutant is viable and cannot utili\nze galactose.\n Cond935:10h\n Cond387:Hypo-osmotic_shock_-_45_min\n Cond449:glucose_vs._reference_pool_car-1\n Cond452:sucrose_vs._reference_pool_car-1\n mSGA1:intracellular sporulation-specific glucoamylase involved in \nglycogen degradation. Induced during starvation of a/a late \nin sporulation, but dispensable for sporulation,glucoamylase\n,suppression of growth arrest of cdc25\n Stress.HeatSorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond65:fus3(haploid)\n Cond490:PHO81c_vs_WT_exp2_\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Cond450:mannose_vs._reference_pool__car-1\n Cond936:12h\n Cond871:yhe710-ss\n Cond451:raffinose_vs._reference_pool_car-1\n Cond465:steady_state_15_dec_C_ct-2\n Cond288:Calcofluorwhite\n Cond88:isw1,isw2\n Cond625:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y12-121\n Cond405:Diauxic_Shift_Timecourse_-_0_h\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond644:DES459_(mec1-)_+_0.02%_MMS_-_60_min\n Cond385:Hypo-osmotic_shock_-_15_min\n Cond422:YPD_stationary_phase_2_h_ypd-1\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond963:t11.5_g/r_ratio\n Cond236:yjl107c(haploid)\n mCDA1:Required for proper formation of the ascospore wall,chitin d\neacetylase,Null mutant is viable, mutants spores disrupted f\nor both cda1 and cda2 fail to emit natural fluorescence and \nare sensitive to hydrolyrtic enzymes, ether, and heat shock\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond319:37C_to_25C_shock_-_90_min\n Cond138:rpl6b\n Cond691:gal5+gal\n Cond483:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp1\n Stress.tempgrow:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond534:tec1D+50nMaF/wt+50nMaF,30minlog10(intensity)\n mSPO19:sporulation-defective; SPO19 was found as a weak high-copy s\nuppressor of the spo1-1 ts mutation. The gene is specificall\ny induced late in meiosis (Primig et al. (2000) Nat Genet 26\n:415-423),meiosis-specific GPI-protein,Null mutant is viable\n; unable to form spores\n mALP1:Homologous to permeases Can1p and Lyp1p,basic amino acid per\nmease,\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis. Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond334:29C_+1M_sorbitol_to_33C_+_*NO_sorbitol_-_30_minutes\n Cond538:fus3D/wtlog10(intensity)\n Chromo.chromo:Genomewide studies of histone deacetylase function in yeast.\n Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13708-13.\n Cond960:t5_g/r_ratio\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond584:cdc15_190\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond473:WT+/-MMS(DBY747)\n Cond938:2h\n Cond964:ndt80_delete_early_g/r_ratio\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Cond392:aa_starv_2_h\n Cond641:DES459_(mec1-)_+_0.02%_MMS_-_15_min\n Cond962:t9_g/r_ratio\n Stress.tempsteady:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mECM23:ExtraCellular Mutant; similar to SRD1,,A Tn3 insertion into \nthis gene causes hypersensitivity to the cell surface polyme\nr perturbing agent calcofluor white.\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n
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Computational Genomics Lab, Tel-Aviv uniresity