Module number 524




Database revision : gnsdb28.10
Date : Tue Feb 25 17:37:19 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function. J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Cond698:gal3-gal\n mYDL109C:Unknown ,, Unknown\n mCRC1:carnitine carrier,carnitine transporter,Null mutant is viabl\ne\n mCTA1:catalase A,catalase A,Null mutant is viable and heat sensiti\nve\n mSRT1:cis-prenyltransferase homologue,cis-prenyltransferase,Null m\nutant is viable, grows at all temperatures tested and is not\n hygromycin B sensitive; srt1 rer2 double disruption mutants\n are inviable; overexpression of SRT1 suppresses the tempera\nture sensitive and slow growth phenotypes of rer2 mutants\n Cond432:YPD_stationary_phase_22_d_ypd-1\n mYMR107W:Unknown ,, Unknown\n mQRI2:Product of gene unknown,,\n Cond418:YPD_1_d_ypd-2\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond362:dtt_000_min__dtt-2\n Cond824:tlc1_Expt.1_Passage_5\n mHSP12:induced by heat shock, entry into stationary phase, depletio\nn of glucose, and addition of lipids (fatty acids),heat shoc\nk protein 12,Null mutant is viable, but shows induction of h\neat shock response under conditions normally associated with\n low-level HSP12 expression\n Cond697:gal2-gal\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond414:YPD_6_h_ypd-2\n Cond416:YPD_10_h__ypd-2\n mYDL211C:Unknown ,, Unknown\n Cond911:(83i5)_S150-2B_YPD_NormInt\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond124:rad6(haploid)\n Cond364:dtt_030_min__dtt-2\n mYDR018C:Unknown ,, Unknown\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond454:YP_fructose_vs_reference_pool_car-2\n mSFC1:succinate-fumarate carrier,succinate-fumarate transport prot\nein,\n mSNF3:glucose sensor,glucose sensor,Null mutant is viable, defecti\nve in high affinity glucose transport, unable to grow on low\n glucose media, unable to grow on raffinose; snf3 delta hxt1\n delta hxt2 delta hxt3 delta hxt4 delta cells are unable to \ngrow on media containing high concentrations of glucose (5%)\n but can grow on low-glucose (0.5%) media; expression of SNF\n3 abolishes growth of hxt1 delta hxt2 delta hxt3 delta hxt4 \ndelta cells on low-glucose medium\n mYFL052W:Unknown ,, Unknown\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond:\n Cond702:gal7-gal\n Cond696:gal1-gal\n mLEE1:Product of gene unknown,,\n Cond310:Heat_Shock_000_minutes_hs-2\n Cond426:YPD_stationary_phase_1_d_ypd-1\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond429:YPD_stationary_phase_5_d_ypd-1\n mYLR311C:Unknown ,, Unknown\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n Cond704:gal80-gal\n Cond705:gal1gal10+gal\n Cond701:gal6-gal\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond420:YPD_3_d_ypd-2\n Cond857:pm38-gtoe\n Cond404:Nitrogen_Depletion_5_d\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n mPDH1:Prpd homolog (ie the propionate operon of many prokary. spec\nifically prpD); close homologs (known to be essential for pr\nopionate utilization) in prokaryotes (several of these homol\nogs are called prpD), & it is transcribed in yeast.,,\n Cond449:glucose_vs._reference_pool_car-1\n Cond689:gal3+gal\n Cond214:yer034w\n Cond452:sucrose_vs._reference_pool_car-1\n mYJL045W:Unknown ,, Unknown\n Cond693:gal7+gal\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond694:gal10+gal\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Cond629:DY_(zap1)_3_mM_vs._61_nM_zinc_y13-76\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Cond450:mannose_vs._reference_pool__car-1\n Cond871:yhe710-ss\n mYNR073C:Unknown ,, Unknown\n Cond419:YPD_2_d_ypd-2\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond700:gal5-gal\n Cond844:expt7\n Cond431:YPD_stationary_phase_13_d_ypd-1\n Cond625:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y12-121\n Cond405:Diauxic_Shift_Timecourse_-_0_h\n mSIR2:regulator of silencing at HML, HMR, telomeres, and rDNA,sile\nncing regulator at HML, HMR, telomeres, and rDNA,Null mutant\n is viable; sir2 mutations suppress mitotic and meiotic intr\na- and interchromosomal rDNA recombination (10-15 fold). RAD\n52 and RAD50 are dispensable for basal level rDNA exchange i\nn SIR2 but are required for increased exchange in sir2\n mUGA4:GABA-specific transport protein,GABA-specific transport prot\nein,Null mutant is viable.\n mODC1:Oxodicarboxylate carrier,mitochondrial 2-oxodicarboxylate tr\nansport protein,\n mNDE2:Unknown ,, Unknown\n Cond688:gal2+gal\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond385:Hypo-osmotic_shock_-_15_min\n Cond692:gal6+gal\n Cond422:YPD_stationary_phase_2_h_ypd-1\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n mYLR312C:Unknown ,, Unknown\n Cond640:DES459_(mec1-)_+_0.02%_MMS_-_5_min\n Cond427:YPD_stationary_phase_2_d_ypd-1\n Cond417:YPD_12_h_ypd-2\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond945:W303_YPD\n mUGX2:Product of gene unknown,,\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond823:tlc1_Expt.1_Passage_4\n Cond415:YPD_8_h_ypd-2\n Cond685:wt-gal\n Cond686:wt+gal\n mYGL146C:Unknown ,, Unknown\n Cond687:gal1+gal\n Cond182:tup1(haploid)\n mYLR327C:Unknown ,, Unknown\n Cond433:YPD_stationary_phase_28_d_ypd-1\n mISF1:May regulate NAM7 function, possibly at level of mRNA turnov\ner,,Null mutant is viable; overexpression suppresses defects\n in hap2, hap3, and hap3 mutants; isf1 mbr1 double mutant ha\ns synthetic phenotypes\n Cond411:diauxic_shift_timecourse_20.5_h\n Cond453:YP_ethanol_vs_reference_pool_car-2\n Cond690:gal4+gal\n mYMR114C:Unknown ,, Unknown\n Cond699:gal4-gal\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Cond421:YPD_5_d_ypd-2\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond703:gal10-gal\n
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Computational Genomics Lab, Tel-Aviv uniresity