Module number 3224




Database revision : gnsdb28.10
Date : Tue Feb 25 17:14:24 2003
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Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond397:Nitrogen_Depletion_2_h\n Cond390:aa_starv_0.5_h\n Cond541:fus3D+50nMaF,30min/wtlog10(intensity)\n mGNP1:high-affinity glutamine permease,high affinity glutamine per\nmease,Null mutant is viable but shows reduced glutamine tran\nsport and is therefore resistant to the glutamine analog L-g\nlutamic acid gamma-monohydroxamate; overexpression induces s\nensitivity to heat shock\n Cond399:Nitrogen_Depletion_8_h\n Cond396:Nitrogen_Depletion_1_h\n Cond798:Ca30'\n mTIP1:cold- and heat-shock induced protein of the Srp1p/Tip1p fami\nly of serine-alanine-rich proteins,cell wall mannoprotein,Nu\nll mutant is viable; exhibits increased sensitivity to calco\nflour white and congo red\n mURA1:dihydroorotate dehydrogenase,dihydroorotate dehydrogenase,ur\nacil requiring\n mYLR413W:Unknown ,, Unknown\n Calcin.CaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond950:TPK1_MT1val\n Cond954:TPK2_MT2val\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n mMUP1:high affinity methionine permease,high affinity methionine p\nermease,Null mutant is viable but cannot perform high-affini\nty methionine update.\n Cond400:Nitrogen_Depletion_12_h\n TPK.TPK:The yeast A kinases differentially regulate iron uptake and \nrespiratory function. Proc Natl Acad Sci U S A. 2000 May 23\n;97(11):5984-8.\n Cond26:cka2\n Cond190:vps8\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond403:Nitrogen_Depletion_3_d\n Cond140:rps24a(**9)\n Cond319:37C_to_25C_shock_-_90_min\n Cond909:(83i3)_HBY4_YPGL+G_NormInt\n Cond402:Nitrogen_Depletion_2_d\n Cond951:WT2val\n Cond394:aa_starv_6_h\n Cond398:Nitrogen_Depletion_4_h\n Cond959:t2_g/r_ratio\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond401:Nitrogen_Depletion_1_d\n Cond802:CaFK30'\n Cond391:aa_starv_1_h\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond965:ndt80_delete_mid_g/r_ratio_\n mBAP2:contains 12 predicted transmembrane domains,amino acid perme\nase for leucine, valine, and isoleucine (putative),reduced u\nptake of leucine, isoleucine, and valine\n Cond474:gcn4D+/-100mM3AT(KNY124)\n mBAP3:branched-chain amino acid permease,valine transporter,\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond393:aa_starv_4_h\n Cond952:TPK1_MT2val\n mYER064C:Unknown ,, Unknown\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mMDH2:cytosolic malate dehydrogenase,malate dehydrogenase,Null mut\nant is viable; fails to grow on minimal medium with acetate \nor ethanol as carbon source\n mCAR1:arginase,arginase,Null mutant is viable but defective in arg\ninine catabolism\n Cond956:TPK3_MT2val\n Cond395:Nitrogen_Depletion_30_min.\n mAGP1:broad substrate range permease which transports asparagine a\nnd glutamine with intermediate specificity,amino acid permea\nse,Null mutant is viable; resistant to the amino acid analog\n gamma-hydroxyaspartate, decreased growth on asn, gln and so\nme other amino acids in strains in which Gap1 and Gnp1 are a\nlso missing.\n Calcin.Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond404:Nitrogen_Depletion_5_d\n Cond392:aa_starv_2_h\n mTAT1:Amino acid transport protein for valine, leucine, isoleucine\n, and tyrosine,amino acid transport protein for valine, leuc\nine, isoleucine, and tyrosine,\n mTAT2:Tryptophan permease, high affinity,tryptophan permease, high\n affinity,suppressor of chromosome segregation mutation\n Cond953:TPK2_MT1val\n
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Computational Genomics Lab, Tel-Aviv uniresity