Module number 3182




Database revision : gnsdb28.10
Date : Tue Feb 25 17:18:54 2003
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Cond755: Cond663:mec1_plus_gamma_10_min\n Cond476:GCN4C/GCN4(R4760/R6257)\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond565:alpha98\n Cond548:cln3-2\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response. Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond751: Cond121:qcr2(haploid)\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond400:Nitrogen_Depletion_12_h\n Cond735: Stress.diamide:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond579:cdc15_140\n Cell Cycle.ko:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond724:t4+SSD1,H44\n Cond562:alpha77\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n mCIS3:cik1 suppressor,similar to Hsp150p and Pir1p, Pir2p, and Pir\n3p,Null mutant is viable; CIS3 is a high copy suppressor of \ncik1 deletion mutants\n Cond376:1.5_mM_diamide_(90_min)\n Cond530:GAL-BNI1D,3hrs.gallog10(intensity)\n mCRH1:congo red hypersensitive,cell wall protein,Null mutant is vi\nable and hypersensitive to Congo Red and Calcofluor White\n Cond568:alpha119\n mCWP1:cell wall protein, involved in O and N glycosylation, accept\nor of B1-6 glucan.,cell wall mannoprotein,Null mutant is via\nble, has increased sensitivities to calcoflour white and con\ngo red\n Cond897:STATMMS\n Cond894:G2\n Cond155:she4\n Cond279:ERG11(tetpromoter)\n Cond752: Cond404:Nitrogen_Depletion_5_d\n Cond61:fks1(haploid)\n mFKS1:Required for viability of calcineurin mutants,1,3-beta-D-glu\ncan synthase,Null mutant is viable, demonstrates slow growth\n, hypersensitivity to FK506 and cyclosporin A, sensitivity t\no echinocandin and a reduction in 1,3-beta-D-glucan synthase\n activity in vitro; sensitivity to papulacandin B\n Cond580:cdc15_150\n Cond361:2.5mM_DTT_180_min_dtt-1\n Cond367:dtt_240_min_dtt-2\n Cond879:MMC\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond581:cdc15_160\n Cond54:erg3(haploid)\n Cond558:alpha49\n Cond572:cdc15_70\n Cond963:t11.5_g/r_ratio\n Cond68:gas1\n Cond52:erd1\n Cond9:ard1\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond582:cdc15_170\n Cond314:Heat_Shock_060_minutes__hs-2\n Cond91:kim4\n Y-Stre.Alkali:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond691:gal5+gal\n Cond571:cdc15_50\n Cond92:kin3\n mPRY2:Pathogen Related in Sc, contains homology to the plant PR-1 \nclass of pathogen related proteins. The protein sequence is \nover 60% identical with the Pry2p & Pry3p over 145 resid. PR\nY1 is >35% identical (50% similar) to tobacco PR-1c protein.\n,,\n Cond737: Cond742: Cond366:dtt_120_min_dtt-2\n Cond754: Cond555:alpha28\n mMSB2:putative integral membrane protein,integral membrane protein\n (putative),multicopy suppressor of cdc24 ts mutation\n mSVS1:involved in vanadate resistance,,Null mutant is viable, show\ns increased sensitivity to vanadate, but not other metallic \nions or drugs\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond964:ndt80_delete_early_g/r_ratio\n Cond564:alpha91\n Cond11:arg5,6\n Cond40:dig1,dig2\n Cond547:cln3-1\n Cond664:mec1_plus_gamma_20_min\n Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond368:dtt_480_min_dtt-2\n Cond292:Glucosamine\n mTOS7:Hypothetical ORF,,\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond130:rml2(**13)\n Cond552:alpha7\n Cond93:kre1\n Cond280:FKS1(tetpromoter)\n Cond140:rps24a(**9)\n Cond892:S\n Cond519:rst1Drst2Dą50nMaF,30minlog10(intensity)\n Cond586:cdc15_210\n Cond28:cla4(haploid)\n mSIM1:(putative) invovled in control of DNA replication,,Null muta\nnt is viable; mutant allows an extra round of DNA replicatio\nn without mitosis\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond940:6h\n Cond739: mCLN2:role in cell cycle START,G1 cyclin,Null mutant is viable, ex\nhibits G1 arrest; dominant mutation advances the G(sub)1- to\n S- phase transition and impairs ability of cells to arrest \nin G(sub)1 phase in response to external signals\n Cond531:GAL-PKC1-R398A,3hrs.gallog10(intensity)\n Cond6:anp1\n Cond285:RHO1(tetpromoter)\n mCSI2:chitin synthase involved,chitin synthase 3 complex structura\nl component (putative),Null mutant is viable but shows deloc\nalized chitin deposition\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond588:cdc15_230\n mYPS3:Gpi-anchored aspartic protease (Yapsin 3),GPI-anchored aspar\ntic protease,Null mutant is viable\n Cond709:t0+Vec\n Cond550:clb2-1\n Cond756: Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond506:bni1Dą50nMaF,60minlog10(intensity)\n Cond287:2-deoxy-D-glucose\n Cond717:t2-SSD1\n Cond278:CDC42(tetpromoter)\n Cond197:yar014c\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond563:alpha84\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond359:2.5mM_DTT_090_min_dtt-1\n Cond134:rpl12a\n mMID2:Protein required for mating,,Null mutant is viable, dies whe\nn exposed to mating pheromone\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond403:Nitrogen_Depletion_3_d\n Cond250:ymr031w-a\n Cond284:PMA1(tetpromoter)\n Cond402:Nitrogen_Depletion_2_d\n mSED1:putative cell surface glycoprotein,cell surface glycoprotein\n (putative),Null mutant is viable; during stationary phase, \nnull mutants exhibit increased sensitivity to Zymolyase.\n Cond738:90\n Cond876:zero2\n Cond776:Alkali_100'\n Cond283:KAR2(tetpromoter)\n Cond743: Cond360:2.5mM_DTT_120_min_dtt-1\n Cond401:Nitrogen_Depletion_1_d\n Cond534:tec1D+50nMaF/wt+50nMaF,30minlog10(intensity)\n Cond984:pho85D_DMSO_24_hrs._vs._F82G_10_mM_1-Na_PP1_24_hrs._\n mEXG1:Exo-1,3-beta-glucanase,exo-1,3-beta-glucanase,Null mutant is\n viable, displays modest increase in killer toxin sensitivit\ny and beta 1,6-glucan levels\n mTOS11:Hypothetical ORF,,\n Cond107:ost3\n Cond348:1mM_Menadione_(40_min)_redo\n Cond560:alpha63\n Cond576:cdc15_110\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond559:alpha56\n mSRL1:Suppressor of rad53 lethality,,\n mSRL3:Suppressor of rad53 lethality,,\n Cond521:fus3-K42Dą50nMaF,30minlog10(intensity)\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond665:mec1_plus_gamma_30_min\n Cond551:alpha0\n Cond549:clb2-2\n Cond939:4h\n Cond884:10\n
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Computational Genomics Lab, Tel-Aviv uniresity