Module number 3161




Database revision : gnsdb28.10
Date : Tue Feb 25 17:16:21 2003
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Cond547:cln3-1\n Cond498:wtħ500nMaF,30minlog10(intensity)\n Cond221:yer083c\n Cond494:wtħ5nMaF,30minlog10(intensity)\n Cond548:cln3-2\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond29:clb2\n Cond500:wtħ50nMaF,15minlog10(intensity)\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond941:SK1_YPD\n Cond735: Cond647:dun1-_+_0.02%_MMs_-_30_min\n Cond504:wtħ50nMaF,90minlog10(intensity)\n Y-Stre.msn2/4acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n mRFA1:Required for DNA-damage repair, full levels of gene conversi\non and sporulation,heterotrimeric RPA (RF-A) single-stranded\n DNA binding protein 69 kDa subunit; binds URS1 and CAR1,Nul\nl mutant is inviable; cells lacking RFA1 accumulate as multi\nply budded cells with a single nucleus suggesting a defect i\nn DNA replication; rfa1 repair defects are suppressed by hig\nh copy RAD52\n mRFA2:Involved in nucleotide excision repair,29% identical to the \nhuman p34 subunit of RF-A , replication factor RF-A subunit \n2,Null mutant is inviable; arrests as budded and multiply bu\ndded cells; rfa2 (ts) cells have a mutator and a hyper-recom\nbination phenotype and are more sensitive to hydroxyurea and\n methyl-methane-sulfonate than wild-type cells\n Cell Cycle.ko:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond15:bim1(**15)\n Cond519:rst1Drst2Dħ50nMaF,30minlog10(intensity)\n Cond669:mec1_plus_gamma_120_min\n Cond505:wtħ50nMaF,120minlog10(intensity)\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond656:wt_plus_gamma_90_min\n Cond53:erg2\n Cond733: Cond940:6h\n Cond509:kss1Dħ50nMaF,30minlog10(intensity)\n Cond562:alpha77\n Cond496:wtħ50nMaF,30minlog10(intensity)\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n mJEM1:DnaJ-like protein of the endoplasmic reticulum membrane,,Nul\nl mutant is viable but has karyogamy defect; jem1 scj1 doubl\ne mutant is temperature sensitive\n Cond948:W303_ume6_YPA_\n mYMR144W:Unknown ,, Unknown\n Cond6:anp1\n Cond934:8h\n Cond566:alpha105\n mPDS5:Precocious Dissociation of Sister chromatids,,\n Cond920:3h\n Cond495:wtħ15.8nMaF,30minlog10(intensity)\n Cond279:ERG11(tetpromoter)\n Cond961:t7_g/r_ratio\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond553:alpha14\n Cond508:bni1Dħ50nMaF,120minlog10(intensity)\n Cond229:yhr011w(**14)\n Cond550:clb2-1\n Cond479:WT+/-100mM3AT(SetD)(R491)\n Cond482:WT+/-100mM3AT(SetC)(KNY164)\n Cond506:bni1Dħ50nMaF,60minlog10(intensity)\n Cond287:2-deoxy-D-glucose\n Stress.HeatSorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond65:fus3(haploid)\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Y-Stre.Heat:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond762:Heat_45'\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond313:Heat_Shock_030inutes__hs-2\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond563:alpha84\n Cond558:alpha49\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n mSEN34:tRNA splicing endonuclease 34kDa subunit; homologous to the \n42-kDa subunit, SEN2; contains active site for 3' splice sit\ne cleavage,tetrameric tRNA splicing endonuclease 34 kDa subu\nnit,Null mutant is inviable and shows H242A impaired 3'splic\ne site cleavage\n Cond68:gas1\n Cond734: Cond946:W303ume6_YPD\n Cond945:W303_YPD\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mSMC3:involved in sister chromatid cohesion,SMC chromosomal ATPase\n family member,Null mutant is inviable\n Cond746: Cond501:wt+/-50nMaF,30minlog10(intensity)\n Cond98:mbp1\n Cond687:gal1+gal\n Cond554:alpha21\n Cond738:90\n Cond483:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp1\n Cond959:t2_g/r_ratio\n Cond571:cdc15_50\n Cond743: Cond778:msn2/4_acid_10'\n Cond294:Itraconazole\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis. Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Cond969:swi1,_minimal_(a)\n Cond334:29C_+1M_sorbitol_to_33C_+_*NO_sorbitol_-_30_minutes\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond737: Cond747: Cond497:wtħ158nMaF,30minlog10(intensity)\n Cond555:alpha28\n Cond299:Tunicamycin\n Cond636:DES460_+_0.2%_MMS_-_45_min\n Cond960:t5_g/r_ratio\n Cond511:GAL-STE4,3hrs.gallog10(intensity)\n Cond503:wtħ50nMaF,60minlog10(intensity)\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond559:alpha56\n Cond750: Cond510:fus3Dħ50nMaF,30minlog10(intensity)\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond551:alpha0\n Cond549:clb2-2\n Cond939:4h\n mRFA1 mRFA2
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Computational Genomics Lab, Tel-Aviv uniresity