Module number 3120




Database revision : gnsdb28.10
Date : Tue Feb 25 17:10:13 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n Cond217:yer050c\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function. J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Cond368:dtt_480_min_dtt-2\n Cond281:HMG2(tetpromoter)\n Cond476:GCN4C/GCN4(R4760/R6257)\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond221:yer083c\n Cond448:galactose_vs._reference_pool_car-1\n Cond396:Nitrogen_Depletion_1_h\n Cond565:alpha98\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response. Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond29:clb2\n Cond130:rml2(**13)\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond362:dtt_000_min__dtt-2\n mUTR2:Product of gene unknown,,\n Cond4:afg3(haploid)\n Cond224:CMD1(tetpromoter)\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond315:37C_to_25C_shock_-_15_min\n Y-Stre.msn2/4acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond99:med2(haploid)\n Cond976:F82G_1_mM_1NaPP1\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond244:ymr010w\n Cond669:mec1_plus_gamma_120_min\n Cond898:RPN4\n Cond843:expt6\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Cond384:Hypo-osmotic_shock_-_5_min\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond53:erg2\n mHNM1:choline transport protein; may also control uptake of nitrog\nen mustard,transporter (permease) for choline and nitrogen m\nustard; share homology with UGA4,Null mutant is viable, but \nhyper-resistant to nitrogen mustard; ctr1,cho1 double null i\ns inviable\n Cond286:YEF3(tetpromoter)\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mOLE1:delta-9-fatty acid desaturase,delta-9-fatty acid desaturase,\nThe null mutant is inviable but can be rescued by addition o\nf unsaturarted fatty acids to the growth medium. Some allele\ns are temperature-sensitive for growth and show defective in\ntracellular mitochondrial movement atthe non- permissive tem\nperature.\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond480:WT+/-100mM3AT(SetA)(R491)\n Cond532:GAL-RHO1-Q68H,3hrs.gallog10(intensity)\n mACC1:acetyl-CoA carboxylase,acetyl CoA carboxylase,acc1 spores fa\nil to enter vegetative growth\n Cond6:anp1\n Cond395:Nitrogen_Depletion_30_min.\n Cond920:3h\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond857:pm38-gtoe\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond893:SMMS\n Cond983:WT_vs_pho85D\n Cond709:t0+Vec\n mCDS1:CDP-diacylglycerol synthase, CTP-phosphatidic acid cytidylyl\ntransferase, CDP-diglyceride synthetase,phosphatidate cytidy\nlyltransferase,Null mutant is inviable\n Cond229:yhr011w(**14)\n Cond689:gal3+gal\n Cond216:yer044c(haploid)\n Cond758:Heat_0'_(A)\n Cond479:WT+/-100mM3AT(SetD)(R491)\n Cond452:sucrose_vs._reference_pool_car-1\n Cond226:yhl029c\n mCHO2:First step in the methylation pathway for phosphatidylcholin\ne biosynthesis,phosphatidyl-ethanolamine N-methyltransferase\n,Null mutant is viable and accumulates phosphatidylethanolam\nine and has reduced levels of phosphatidylcholine\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond478:WT+/-10mM3AT(R491)\n Y-Stre.Heat:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond451:raffinose_vs._reference_pool_car-1\n Cond895:G2MMS\n Cond918:1h\n Cond708:t0+SSD1\n Cond481:WT+/-100mM3AT(SetB)(491)\n Cond54:erg3(haploid)\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond385:Hypo-osmotic_shock_-_15_min\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond877:MMS\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond642:DES459_(mec1-)_+_0.02%_MMS_-_30_min\n Cond886:g-ray\n Cond9:ard1\n Cond175:swi4\n Cond328:33C_vs._30C_-_90_minutes\n Cond779:msn2/4_acid_20'\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond403:Nitrogen_Depletion_3_d\n Cond250:ymr031w-a\n Cond284:PMA1(tetpromoter)\n Cond402:Nitrogen_Depletion_2_d\n Cond27:ckb2\n mFAS1:pentafunctional enzyme consisting of the following domains :\n acetyl transferase, enoyl reductase, dehydratase and malony\nl/palmityl transferase,acetyl transferase , dehydratase , en\noyl reductase , malonyl/palmityl transferase , pentafunction\nal enzyme,Null mutant is viable\n Cond723:t2-SSD1,M31\n mFAS2:Trifunctional enzyme,fatty acid synthase alpha subunit,Fatty\n acid synthetase deficient\n Cond162:spf1\n mITR1:member of sugar transporter superfamily,myo-inositol transpo\nrter,Null mutant is viable\n Cond475:0.5x/1xAA(MildLeu,HisStarvation)(R176)\n Cond645:DES459_(mec1-)_+_0.02%_MMS_-_90_min\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond891:G1MMS\n Cond474:gcn4D+/-100mM3AT(KNY124)\n Cond265:ymr293c\n Cond845:expt8\n Cond299:Tunicamycin\n Cond636:DES460_+_0.2%_MMS_-_45_min\n Cond237:yml003w\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond938:2h\n Cond964:ndt80_delete_early_g/r_ratio\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Cond884:10\n
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Computational Genomics Lab, Tel-Aviv uniresity