Module number 3095




Database revision : gnsdb28.10
Date : Tue Feb 25 17:16:55 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n Cond158:sir2\n Cond277:AUR1(tetpromoter)\n Cond698:gal3-gal\n Cond476:GCN4C/GCN4(R4760/R6257)\n Cond399:Nitrogen_Depletion_8_h\n Cond221:yer083c\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Cond649:dun1-_+_0.02%_MMS_-_120_min\n Cond164:sst2(haploid)\n Cond13:ase1(**12)\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond400:Nitrogen_Depletion_12_h\n Cond648:dun1-_+_0.02%_MMS_-_90_min\n Cond730:hda1\n Cond697:gal2-gal\n Cond315:37C_to_25C_shock_-_15_min\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Cond244:ymr010w\n Cond364:dtt_030_min__dtt-2\n Cond445:Msn4_overexpression\n Cond30:clb6\n Cond724:t4+SSD1,H44\n Cond702:gal7-gal\n Cond517:sst2D/wtlog10(intensity)\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond480:WT+/-100mM3AT(SetA)(R491)\n Cond184:ubr1\n Cond718:t4+SSD1wt\n Cond123:rad57\n Cond279:ERG11(tetpromoter)\n Cond701:gal6-gal\n Cond404:Nitrogen_Depletion_5_d\n Cond247:ymr029c\n Cond61:fks1(haploid)\n Cond216:yer044c(haploid)\n Cond86:imp2'(**12)\n Cond693:gal7+gal\n Cond226:yhl029c\n Cond482:WT+/-100mM3AT(SetC)(KNY164)\n Cond430:YPD_stationary_phase_7_d_ypd-1\n mTRP2:anthranilate synthase Component I,anthranilate synthase comp\nonent I,tryptophan requiring\n Cond71:gln3\n Cond716:t2+SSD1wt\n Cond767:Acid_40'\n Cond688:gal2+gal\n Cond708:t0+SSD1\n Cond481:WT+/-100mM3AT(SetB)(491)\n Cond54:erg3(haploid)\n Cond784:Peroxide_120'\n Cond233:yhr039c\n Cond68:gas1\n Cond26:cka2\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond69:gcn4\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond746: Cond27:ckb2\n Cond731:hda1 \n Cond73:gyp1\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond691:gal5+gal\n Cond634:DES460_+_0.02%_MMS_-_15_min\n Cond475:0.5x/1xAA(MildLeu,HisStarvation)(R176)\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond25:cin5\n Chromo.chromo:Genomewide studies of histone deacetylase function in yeast.\n Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13708-13.\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond964:ndt80_delete_early_g/r_ratio\n Cond160:sir4\n Cond135:rpl20a\n Cond477:GCN4/gcn4Din100mM3AT(KNY164/KNY124)\n Cond102:mrt4\n Cond464:37_deg_growth_ct-1\n Cond136:rpl27a(**4)\n Cond316:37C_to_25C_shock_-_30_min\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond711:t2+Vec\n Cond29:clb2\n Cond224:CMD1(tetpromoter)\n Cond647:dun1-_+_0.02%_MMs_-_30_min\n mARO1:pentafunctional arom polypeptide (contains: 3-dehydroquinate\n synthase, 3-dehydroquinate dehydratase (3-dehydroquinase), \nshikimate 5-dehydrogenase, shikimate kinase, and epsp syntha\nse),3-dehydroquinate dehydratase (3-dehydroquinase) , 3-dehy\ndroquinate synthase , epsp synthase , pentafunctional arom p\nolypeptide , shikimate 5-dehydrogenase , shikimate kinase,ar\nomatic amino acid requiring; lack of premeiotic DNA synthesi\ns; blocked sporulation in homozygous mutant\n Cond190:vps8\n Cond561:alpha70\n Y-Stre.msn2/4acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n mARO4:3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase \nisoenzyme,3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)\n synthase isoenzyme,null mutant is viable\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond414:YPD_6_h_ypd-2\n Cond729:sin3\n Cond745: Cond90:jnm1\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond53:erg2\n Y-Stre.Acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond733: Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond940:6h\n Cond437:DBYyap1-_37degree_heat_-_20_min_(redo)\n Cond6:anp1\n Cond937:t=0\n Cond635:DES460_+_0.02%_MMS_-_30_min\n Cond298:Terbinafine\n Cond78:hir2\n Cond180:top1(haploid)\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond420:YPD_3_d_ypd-2\n Cond201:yel008w\n Cond709:t0+Vec\n Cond229:yhr011w(**14)\n Cond935:10h\n Cond345:1_mM_Menadione_(10_min)redo\n Cond176:swi5\n Cond317:37C_to_25C_shock_-_45_min\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond287:2-deoxy-D-glucose\n Cond478:WT+/-10mM3AT(R491)\n Cond128:rgt1\n Cond431:YPD_stationary_phase_13_d_ypd-1\n Cond144:rtg1\n Cond150:sbh2\n mUGA3:Transcriptional activator necessary for gamma-aminobutyrate \n(GABA)-dependent induction of GABA genes (such as UGA1, UGA2\n, UGA4),zinc finger transcription factor of the Zn(2)-Cys(6)\n binuclear cluster domain type,Null mutant is viable but exh\nibits defects in activation of UGA1 and UGA4.\n Cond278:CDC42(tetpromoter)\n Cond43:dot4\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond24:cem1\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond132:rnr1(haploid**9)\n Cond134:rpl12a\n Cond171:ste24(haploid)\n Cond62:fpr1\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mASN1:Asn1p and Asn2p are isozymes,asparagine synthetase,Null muta\nnt is viable; L-asparagine auxotrophy occurs upon mutation o\nf both ASN1 and ASN2\n Cond175:swi4\n Cond779:msn2/4_acid_20'\n Cond403:Nitrogen_Depletion_3_d\n Cond250:ymr031w-a\n Cond685:wt-gal\n Cond402:Nitrogen_Depletion_2_d\n Cond153:sgs1\n Stress.tempgrow:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond682:MHY1_(crt1)_vs_CRY1_(wild_type)\n Cond401:Nitrogen_Depletion_1_d\n Cond294:Itraconazole\n Cond715:t0-SSD1\n Cond159:sir3\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond295:Lovastatin\n Cond299:Tunicamycin\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond938:2h\n Cond421:YPD_5_d_ypd-2\n Y-Stre.Peroxide:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond641:DES459_(mec1-)_+_0.02%_MMS_-_15_min\n Cond428:YPD_stationary_phase_3_d_ypd-1\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond703:gal10-gal\n
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Computational Genomics Lab, Tel-Aviv uniresity