Module number 3084




Database revision : gnsdb28.10
Date : Tue Feb 25 17:14:51 2003
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Cond330:29C_+1M_sorbitol_to_33C_+_1M_sorbitol_-_15_minutes\n Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n Cond498:wtħ500nMaF,30minlog10(intensity)\n Cond796:Ca5'\n Cond912:(99i1)_S150-2B_YPGL_NormInt\n Cond221:yer083c\n Cond494:wtħ5nMaF,30minlog10(intensity)\n Cond798:Ca30'\n Cond548:cln3-2\n Cond578:cdc15_130\n Cond649:dun1-_+_0.02%_MMS_-_120_min\n Cond751: Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond533:fus3D+50nMaF/wt+50nMaF,30minlog10(intensity)\n Cond406:diauxic_shift_timecourse_9.5_h\n Cond648:dun1-_+_0.02%_MMS_-_90_min\n Cond730:hda1\n Cond579:cdc15_140\n Cond315:37C_to_25C_shock_-_15_min\n mRFA1:Required for DNA-damage repair, full levels of gene conversi\non and sporulation,heterotrimeric RPA (RF-A) single-stranded\n DNA binding protein 69 kDa subunit; binds URS1 and CAR1,Nul\nl mutant is inviable; cells lacking RFA1 accumulate as multi\nply budded cells with a single nucleus suggesting a defect i\nn DNA replication; rfa1 repair defects are suppressed by hig\nh copy RAD52\n Cell Cycle.ko:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond573:cdc15_80\n Cond425:YPD_stationary_phase_12_h_ypd-1\n mPOL12:Required for DNA synthesis and correct progression through S\n phase; plays an essential role at early stage of chromosoma\nl DNA replication, before the hydroxyurea-sensitive step,DNA\n polymerase alpha-primase complex B subunit,Null mutant is i\nnviable\n mCDC45:Cdc45p assembles into a complex with Cdc46p/Mcm5p,chromosoma\nl DNA replication initiation protein,required for minichromo\nsome maintenance and chromosomal DNA replication\n Cond505:wtħ50nMaF,120minlog10(intensity)\n Cond562:alpha77\n Cond668:mec1_plus_gamma_90_min\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond769:Acid_80'\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond480:WT+/-100mM3AT(SetA)(R491)\n Cond568:alpha119\n Cond279:ERG11(tetpromoter)\n Cond553:alpha14\n Cond312:Heat_Shock_015_minutes_hs-2\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond508:bni1Dħ50nMaF,120minlog10(intensity)\n Cond61:fks1(haploid)\n Cond749: Cond216:yer044c(haploid)\n Cond479:WT+/-100mM3AT(SetD)(R491)\n Cond482:WT+/-100mM3AT(SetC)(KNY164)\n Cond580:cdc15_150\n Cond65:fus3(haploid)\n Cond797:Ca15'\n Cond767:Acid_40'\n Cond313:Heat_Shock_030inutes__hs-2\n Cond481:WT+/-100mM3AT(SetB)(491)\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond54:erg3(haploid)\n Cond581:cdc15_160\n Cond558:alpha49\n mSEN34:tRNA splicing endonuclease 34kDa subunit; homologous to the \n42-kDa subunit, SEN2; contains active site for 3' splice sit\ne cleavage,tetrameric tRNA splicing endonuclease 34 kDa subu\nnit,Null mutant is inviable and shows H242A impaired 3'splic\ne site cleavage\n Cond68:gas1\n Cond734: gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond819:crz1/Na45'_\n Cond746: Cond582:cdc15_170\n Cond314:Heat_Shock_060_minutes__hs-2\n Cond687:gal1+gal\n Cond27:ckb2\n Cond781:Peroxide_20'\n Cond959:t2_g/r_ratio\n Cond571:cdc15_50\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond787:NaCl_45'\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond737: Cond555:alpha28\n Chromo.chromo:Genomewide studies of histone deacetylase function in yeast.\n Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13708-13.\n Cond570:cdc15_30\n Cond960:t5_g/r_ratio\n Cond503:wtħ50nMaF,60minlog10(intensity)\n Cond511:GAL-STE4,3hrs.gallog10(intensity)\n Cond695:gal80+gal\n Calcin.Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond438:DBYyap1_+_37degree_heat_(repeat)\n Cond510:fus3Dħ50nMaF,30minlog10(intensity)\n Cond477:GCN4/gcn4Din100mM3AT(KNY164/KNY124)\n Cond40:dig1,dig2\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond790:Sorbitol_15'\n Cond547:cln3-1\n mMCD1:Mitotic Chromosome Determinant; similar to S. pombe RAD21; m\nay function in chromosome morphogenesis from S phase through\n mitosis,,Null mutant is inviable; temperature sensitive mut\nants are defective in mitotic sister chromatid cohesion and \nmitotic chromosome condensation; multicopy suppressor of smc\n1-2 mutation\n Cond281:HMG2(tetpromoter)\n mTOS4:Hypothetical ORF,,\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond500:wtħ50nMaF,15minlog10(intensity)\n Cond29:clb2\n Cond763:Heat_60'\n Cond782:Peroxide_40'\n Cond280:FKS1(tetpromoter)\n Cond504:wtħ50nMaF,90minlog10(intensity)\n Cond561:alpha70\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond414:YPD_6_h_ypd-2\n Cond15:bim1(**15)\n Cond519:rst1Drst2Dħ50nMaF,30minlog10(intensity)\n Cond669:mec1_plus_gamma_120_min\n Cond586:cdc15_210\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond53:erg2\n Cond733: Y-Stre.Acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond940:6h\n Cond507:bni1Dħ50nMaF,90minlog10(intensity)\n Cond509:kss1Dħ50nMaF,30minlog10(intensity)\n Cond496:wtħ50nMaF,30minlog10(intensity)\n Cond587:cdc15_220\n Cond937:t=0\n Cond934:8h\n Cond920:3h\n Cond495:wtħ15.8nMaF,30minlog10(intensity)\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond857:pm38-gtoe\n Cond379:1M_sorbitol_-_30_min\n Cond229:yhr011w(**14)\n Cond768:Acid_60'\n Cond550:clb2-1\n Cond506:bni1Dħ50nMaF,60minlog10(intensity)\n Cond287:2-deoxy-D-glucose\n Stress.HeatSorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Y-Stre.Heat:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond762:Heat_45'\n Cond278:CDC42(tetpromoter)\n Cond149:sap30\n Y-Stre.NaCl:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond502:wtħ50nMaF,45minlog10(intensity)\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond563:alpha84\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond175:swi4\n Y-Stre.Sorbitol:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Stress.Sorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond501:wt+/-50nMaF,30minlog10(intensity)\n Cond98:mbp1\n Cond686:wt+gal\n Cond554:alpha21\n Cond738:90\n Calcin.crz1Na:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond575:cdc15_100\n Cond283:KAR2(tetpromoter)\n Cond743: Cond707:gal4gal80-gal\n Cond294:Itraconazole\n Cond574:cdc15_90\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond474:gcn4D+/-100mM3AT(KNY124)\n Cond348:1mM_Menadione_(40_min)_redo\n Cond538:fus3D/wtlog10(intensity)\n Cond747: Cond497:wtħ158nMaF,30minlog10(intensity)\n Cond576:cdc15_110\n Cond299:Tunicamycin\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond736: Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond938:2h\n Cond559:alpha56\n Y-Stre.Peroxide:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond577:cdc15_120\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond551:alpha0\n Cond549:clb2-2\n Cond939:4h\n
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Computational Genomics Lab, Tel-Aviv uniresity