Module number 2549




Database revision : gnsdb28.10
Date : Tue Feb 25 17:23:47 2003
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Cond755: Cond498:wtħ500nMaF,30minlog10(intensity)\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function. J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Cond541:fus3D+50nMaF,30min/wtlog10(intensity)\n Cond494:wtħ5nMaF,30minlog10(intensity)\n Cond565:alpha98\n Cond548:cln3-2\n Cond578:cdc15_130\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response. Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond751: Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond533:fus3D+50nMaF/wt+50nMaF,30minlog10(intensity)\n Cond740: Cond735: mHHO1:Histone H1,histone H1,Null mutant is viable; other phenotype\n: Increased basal expression of a CYC1-lacz reporter gene; n\nuclear localization of a Hho1-GFP fusion protein\n Cond556:alpha35\n Cell Cycle.ko:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n mYMR071C:Unknown ,, Unknown\n Calcin.NaNa:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond364:dtt_030_min__dtt-2\n Cond505:wtħ50nMaF,120minlog10(intensity)\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond769:Acid_80'\n Cond805:Ca/Ca+FK30'\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond480:WT+/-100mM3AT(SetA)(R491)\n Cond817:Na/Na+FK45'\n Cond279:ERG11(tetpromoter)\n Cond553:alpha14\n Cond752: Cond508:bni1Dħ50nMaF,120minlog10(intensity)\n Cond749: Cond902:(77i1)_HBY4_YPGL_NormInt\n Cond569:cdc15_10\n Cond807:crz1/Ca30'\n Cond580:cdc15_150\n Cond804:Ca/Ca+FK15'\n Cond767:Acid_40'\n Cond581:cdc15_160\n Cond572:cdc15_70\n Cond734: Cond512:GAL-STE5-CTM,3hrs.gallog10(intensity)\n Cond816:Na/Na+FK30'\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond582:cdc15_170\n Cond653:wt_plus_gamma_30_min\n Y-Stre.Alkali:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n mYMR073C:Unknown ,, Unknown\n Cond571:cdc15_50\n Calcin.Ca/Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond583:cdc15_180\n Cond742: Calcin.crz1:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond555:alpha28\n Cond493:wtħ1.5nMaF,30minlog10(intensity)\n Cond903:(77i2)_S150-2B_YPGL_NormInt\n Cond503:wtħ50nMaF,60minlog10(intensity)\n Cond584:cdc15_190\n Cond511:GAL-STE4,3hrs.gallog10(intensity)\n Cond842:expt5\n Cond564:alpha91\n Cond510:fus3Dħ50nMaF,30minlog10(intensity)\n Cond652:wt_plus_gamma_20_min\n Cond547:cln3-1\n Cond978:pho85D_1_mM_1NaPP1_\n Cond982:pho85D_10_mM_1NaPP1_\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond500:wtħ50nMaF,15minlog10(intensity)\n Cond130:rml2(**13)\n Cond552:alpha7\n Cond224:CMD1(tetpromoter)\n Cond504:wtħ50nMaF,90minlog10(intensity)\n Cond770:Acid_100'\n Cond561:alpha70\n Cond519:rst1Drst2Dħ50nMaF,30minlog10(intensity)\n Cond15:bim1(**15)\n Cond745: Cond967:swi1,_YPD_(c)\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond651:wt_plus_gamma_10_min\n Y-Stre.Acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond507:bni1Dħ50nMaF,90minlog10(intensity)\n Cond739: Cond509:kss1Dħ50nMaF,30minlog10(intensity)\n Cond496:wtħ50nMaF,30minlog10(intensity)\n Cond748: Cond566:alpha105\n Cond495:wtħ15.8nMaF,30minlog10(intensity)\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond768:Acid_60'\n Cond935:10h\n Cond550:clb2-1\n mHHT1:Histone H3 (HHT1 and HHT2 code for identical proteins),histo\nne H3 (HHT1 and HHT2 code for identical proteins),Null mutan\nt is viable\n Cond515:far1Dħ50nMaF,30minlog10(intensity)\n Cond557:alpha42\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond506:bni1Dħ50nMaF,60minlog10(intensity)\n Cond589:cdc15_240\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond502:wtħ50nMaF,45minlog10(intensity)\n Cond841:expt4\n Cond563:alpha84\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond806:crz1/Ca15'\n Cond175:swi4\n Cond775:Alkali_80'\n Stress.Sorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond501:wt+/-50nMaF,30minlog10(intensity)\n Cond738:90\n Cond398:Nitrogen_Depletion_4_h\n Cond575:cdc15_100\n mHHF2:Histone H4 (HHF1 and HHF2 code for identical proteins),histo\nne H4 (HHF1 and HHF2 code for identical proteins),\n Cond732:fkh1,2_alpha_factor_000_min_y12n57\n Cond776:Alkali_100'\n Cond294:Itraconazole\n Cond380:1M_sorbitol_-_45_min_\n Cond747: Cond497:wtħ158nMaF,30minlog10(intensity)\n Cond560:alpha63\n Cond576:cdc15_110\n Cond736: Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond979:WT_10_mM_1NaPP1\n Cond514:GAL-STE12,3hrs.gallog10(intensity)\n Cond577:cdc15_120\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond551:alpha0\n mHTB2:Histone H2B (HTB1 and HTB2 code for nearly identical protein\ns),histone H2B (HTB1 and HTB2 code for nearly identical prot\neins),Null mutant is viable. Deletion of the HTA2-HTB2 (TRT2\n) locus has no reported observable phenotypes, presumably be\ncause HTA1-HTB1 (TRT1) expression is upregulated and can com\npensate in the absence of TRT2\n mYOX1:Homeodomain protein that binds leu-tRNA gene,homeobox-domain\n containing protein,Null mutant is viable\n mHHT1 mHHF2
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Computational Genomics Lab, Tel-Aviv uniresity