Module number 2501




Database revision : gnsdb28.10
Date : Tue Feb 25 17:15:50 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes.  Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond896:STAT\n Cond432:YPD_stationary_phase_22_d_ypd-1\n mYMR107W:Unknown ,, Unknown\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond388:Hypo-osmotic_shock_-_60_min\n mYPL280W:Unknown ,, Unknown\n Cond418:YPD_1_d_ypd-2\n Cond291:FR901,228\n Cond362:dtt_000_min__dtt-2\n Cond824:tlc1_Expt.1_Passage_5\n Cond400:Nitrogen_Depletion_12_h\n Cond363:dtt_015_min_dtt-2\n Cond735: Cond730:hda1\n Cond834:tlc1_Expt.2_Passage_6\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mYMR322C:Unknown ,, Unknown\n Cond467:steady_state_21_dec_C_ct-2\n Cond729:sin3\n Cond416:YPD_10_h__ypd-2\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond364:dtt_030_min__dtt-2\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond454:YP_fructose_vs_reference_pool_car-2\n Cond733: Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond:\n Cond426:YPD_stationary_phase_1_d_ypd-1\n Cond457:YP_mannose_vs_reference_pool_car-2\n Cond966:swi1,_YPD_(a)\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond920:3h\n Cond459:YP_sucrose_vs_reference_pool_car-2\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond404:Nitrogen_Depletion_5_d\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond387:Hypo-osmotic_shock_-_45_min\n Cond449:glucose_vs._reference_pool_car-1\n mYPR150W:Unknown ,, Unknown\n Cond452:sucrose_vs._reference_pool_car-1\n Cond211:yer024w\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Cond87:isw1\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast.  Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Cond450:mannose_vs._reference_pool__car-1\n Stress.H202:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond871:yhe710-ss\n Cond419:YPD_2_d_ypd-2\n Cond367:dtt_240_min_dtt-2\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae.  Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond431:YPD_stationary_phase_13_d_ypd-1\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae.  Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond88:isw1,isw2\n mSNZ2:Snooze: stationary phase-induced gene family,,hypersporulati\non\n Cond405:Diauxic_Shift_Timecourse_-_0_h\n mSNZ3:Snooze: stationary phase-induced gene family,,hypersporulati\non\n Cond456:YP_glucose_vs_reference_pool_car-2\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond385:Hypo-osmotic_shock_-_15_min\n Cond422:YPD_stationary_phase_2_h_ypd-1\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n mYLR312C:Unknown ,, Unknown\n Cond427:YPD_stationary_phase_2_d_ypd-1\n mSNO2:SNZ2 proximal ORF, stationary phase induced gene,,Null mutan\nt is viable.\n Cond417:YPD_12_h_ypd-2\n mYEL068C:Unknown ,, Unknown\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond403:Nitrogen_Depletion_3_d\n Cond746: Cond415:YPD_8_h_ypd-2\n Cond284:PMA1(tetpromoter)\n Cond833:tlc1_Expt.2_Passage_5\n mGIT1:permease involved in the uptake of glycerophosphoinositol (G\nroPIns),permease involved in the uptake of glycerophosphoino\nsitol (GroPIns),Null mutant is viable, exhibits decreased Gr\noPIns transport\n mFIG1:Factor-Induced Gene 1: expression is induced by the mating p\nheromones, a and alpha factor; required for efficient mating\n,integral membrane protein,Null mutant is viable, deficient \nin mating\n Cond402:Nitrogen_Depletion_2_d\n Cond365:dtt_060_min_dtt-2\n Cond731:hda1
\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond691:gal5+gal\n Cond483:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp1\n Cond401:Nitrogen_Depletion_1_d\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis.  Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Cond942:SK1ume6_YPD\n mSIP18:Salt-Induced Protein,,Null mutant is viable.\n Cond206:yel044w\n Cond727:rpd3\n Cond453:YP_ethanol_vs_reference_pool_car-2\n Chromo.chromo:Genomewide studies of histone deacetylase function in yeast.\n  Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13708-13.\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast.  Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond133:rpd3(haploid)\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond695:gal80+gal\n Cond343:constant_0.32_mM_H2O2_(120_min)_redo\n mTHI5:proposed biosynthetic enzyme involved in pyrimidine biosynth\nesis pathway above the hydroxymethyl-pyrimidine precursor le\nading to the thiaminemoiety,thiamine regulated pyrimidine pr\necursor biosynthesis enzyme,\n Cond428:YPD_stationary_phase_3_d_ypd-1\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth.  Nature. 2000 Jul 6;406(6791):90-4.\n Stress.tempsteady:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mSNZ3 mYMR322C mSNZ2 mSNO2

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Computational Genomics Lab, Tel-Aviv uniresity