Module number 2424




Database revision : gnsdb28.10
Date : Tue Feb 25 17:14:31 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n Cond158:sir2\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond221:yer083c\n Cond388:Hypo-osmotic_shock_-_60_min\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response. Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond164:sst2(haploid)\n Cond418:YPD_1_d_ypd-2\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond362:dtt_000_min__dtt-2\n Cond740: Cond735: Cond648:dun1-_+_0.02%_MMS_-_90_min\n Cond834:tlc1_Expt.2_Passage_6\n Cond657:wt_plus_gamma_120_min\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond412:YPD_2_h_ypd-2\n Cond416:YPD_10_h__ypd-2\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond364:dtt_030_min__dtt-2\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Cond822:tlc1_Expt.1_Passage_3\n Cond142:rps27b(**11)\n Cond:\n Cond696:gal1-gal\n Cond517:sst2D/wtlog10(intensity)\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond231:yhr031c\n Cond123:rad57\n Cond900:(11i1)_S150-2B_YPGL_NormInt\n Cond155:she4\n Cond279:ERG11(tetpromoter)\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond216:yer044c(haploid)\n Cond452:sucrose_vs._reference_pool_car-1\n Cond694:gal10+gal\n Cond367:dtt_240_min_dtt-2\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond293:HU\n mCOS12:Protein with strong similarity to subtelomerically-encoded p\nroteins including Cos2p, Cos4p, Cos8p, YIR040c, Cos5p, Cos9p\n, and Cos6p,,\n Cond52:erd1\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond653:wt_plus_gamma_30_min\n Cond833:tlc1_Expt.2_Passage_5\n Cond365:dtt_060_min_dtt-2\n Cond41:dig1,dig2(haploid)\n Cond969:swi1,_minimal_(a)\n Cond206:yel044w\n Cond727:rpd3\n Chromo.chromo:Genomewide studies of histone deacetylase function in yeast.\n Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13708-13.\n Cond237:yml003w\n Cond381:1M_sorbitol_-_60_min\n Cond970:swi1,_minimal_(c)\n Cond639:DES460_+_0.02%_MMS_-_120_min\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond343:constant_0.32_mM_H2O2_(120_min)_redo\n mTHI5:proposed biosynthetic enzyme involved in pyrimidine biosynth\nesis pathway above the hydroxymethyl-pyrimidine precursor le\nading to the thiaminemoiety,thiamine regulated pyrimidine pr\necursor biosynthesis enzyme,\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond332:29C_+1M_sorbitol_to_33C_+_*NO_sorbitol_-_5_minutes\n Cond102:mrt4\n Cond368:dtt_480_min_dtt-2\n Cond836:tlc1_Expt.2_Passage_8\n Cond291:FR901,228\n Cond654:wt_plus_gamma_45_min\n Cond824:tlc1_Expt.1_Passage_5\n Cond363:dtt_015_min_dtt-2\n Cond971:swi1,_minimal_(d)_\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond99:med2(haploid)\n Cond729:sin3\n Cond15:bim1(**15)\n Cond2:ade2(haploid)\n Cond516:rst1Drst2D/wtlog10(intensity)\n Cond125:ras1\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond967:swi1,_YPD_(c)\n Cond656:wt_plus_gamma_90_min\n Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond832:tlc1_Expt.2_Passage_4\n Cond426:YPD_stationary_phase_1_d_ypd-1\n Cond344:constant_0.32_mM_H2O2_(160_min)_redo\n mTHI11:thiamine regulated gene, homologous to S. pombe NMT1A. Propo\nsed biosynthetic enzyme involved in pyrimidine biosynth. pat\nhway above the hydroxymethyl-pyrimidine precursor leading to\n the thiamine moiety. Three copies THI5, THI11 & THI12,thiam\nine biosynthetic enzyme,\n mTHI13:Product of gene unknown,,\n Cond753: COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond340:constant_0.32_mM_H2O2_(60_min)_redo\n Cond449:glucose_vs._reference_pool_car-1\n mYPS5:Gpi-anchored aspartic protease (Yapsin 5),GPI-anchored aspar\ntic protease,\n Cond271:yor051c(**14)\n Cond354:2.5mM_DTT_005_min_dtt-1\n Cond273:yor078w\n Stress.HeatSorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.H202:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond450:mannose_vs._reference_pool__car-1\n Cond419:YPD_2_d_ypd-2\n Cond871:yhe710-ss\n Cond405:Diauxic_Shift_Timecourse_-_0_h\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond149:sap30\n Cond17:bub1(haploid**2,10)\n Cond197:yar014c\n Cond43:dot4\n Cond835:tlc1_Expt.2_Passage_7\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond640:DES459_(mec1-)_+_0.02%_MMS_-_5_min\n Cond877:MMS\n Cond132:rnr1(haploid**9)\n Cond417:YPD_12_h_ypd-2\n Cond42:dig2\n Cond342:constant_0.32_mM_H2O2_(100_min)_redo\n Cond175:swi4\n Cond823:tlc1_Expt.1_Passage_4\n Stress.Sorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond250:ymr031w-a\n Cond415:YPD_8_h_ypd-2\n Cond182:tup1(haploid)\n Cond98:mbp1\n Cond284:PMA1(tetpromoter)\n Cond685:wt-gal\n Cond252:ymr040w\n mYPR014C:Unknown ,, Unknown\n Cond534:tec1D+50nMaF/wt+50nMaF,30minlog10(intensity)\n Cond984:pho85D_DMSO_24_hrs._vs._F82G_10_mM_1-Na_PP1_24_hrs._\n Cond154:sgt2\n Cond334:29C_+1M_sorbitol_to_33C_+_*NO_sorbitol_-_30_minutes\n Cond129:rip1\n Cond831:tlc1_Expt.2_Passage_3\n Cond968:swi1,_YPD_(d)\n Cond299:Tunicamycin\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond274:yor080w(**3)\n Cond161:sod1(haploid)\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond133:rpd3(haploid)\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond35:cup5\n Cond655:wt_plus_gamma_60_min\n Cond577:cdc15_120\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n
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Computational Genomics Lab, Tel-Aviv uniresity