Module number 2294




Database revision : gnsdb28.10
Date : Tue Feb 25 17:17:01 2003
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Cond547:cln3-1\n Cond368:dtt_480_min_dtt-2\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n mTOS6:Hypothetical ORF,,\n Cond565:alpha98\n Cond548:cln3-2\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins. Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Calcin.CaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond552:alpha7\n Cond751: Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond400:Nitrogen_Depletion_12_h\n Cond941:SK1_YPD\n Cond735: Stress.diamide:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond556:alpha35\n mPSA1:mannose-1-phosphate guanyltransferase, GDP-mannose pyrophosp\nhorylase,GDP-mannose pyrophosphorylase , mannose-1-phosphate\n guanyltransferase , GDP-mannose pyrophosphorylase , mannose\n-1-phosphate guanyltransferase , GDP-mannose pyrophosphoryla\nse , mannose-1-phosphate guanyltransferase,Null mutant is in\nviable; PSA1 is an extragenic suppressor of alg1 mutants; os\nmotically sensitive--lyses upon transfer to hypertonic condi\ntions\n Cond892:S\n Cell Cycle.ko:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond573:cdc15_80\n mVRG4:May regulate Golgi function and glycosylation in Golgi,,Null\n mutant is inviable; mutants exist with defects in Golgi-spe\ncific glycosylation, resistance to vanadate, sensitivity to \naminoglycosides, and sporulation defects\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond898:RPN4\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond454:YP_fructose_vs_reference_pool_car-2\n Cond880:BCNU\n mYDR134C:Unknown ,, Unknown\n Cond872:Zero1\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond889:4NQO_2\n Cond739: Cond873:10min\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n mCIS3:cik1 suppressor,similar to Hsp150p and Pir1p, Pir2p, and Pir\n3p,Null mutant is viable; CIS3 is a high copy suppressor of \ncik1 deletion mutants\n Cond376:1.5_mM_diamide_(90_min)\n Cond437:DBYyap1-_37degree_heat_-_20_min_(redo)\n Cond948:W303_ume6_YPA_\n Cond820:tlc1_Expt.1_Passage_1\n Cond897:STATMMS\n mYOR175C:Unknown ,, Unknown\n Cond279:ERG11(tetpromoter)\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond752: Cond404:Nitrogen_Depletion_5_d\n Cond588:cdc15_230\n Cond893:SMMS\n Cond508:bni1Dą50nMaF,120minlog10(intensity)\n Cond852:30_min\n Cond550:clb2-1\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Stress.H202:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond895:G2MMS\n Cond878:MNNG\n Cond54:erg3(haploid)\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond882:zero3\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond563:alpha84\n Cond422:YPD_stationary_phase_2_h_ypd-1\n Cond877:MMS\n mEMP24:type I transmembrane protein, component of COPII-coated, ER-\nderived transport vesicles,type I transmembrane protein,Null\n mutant is viable\n Cond875:60min\n Cond734: Cond886:g-ray\n Cond803:CaFK60'\n mLAC1:Longevity-assurance gene 1 cognate (LAG1 cognate),LAG1 longe\nvity gene homolog,Null mutant is viable but exhibits synthet\nic lethality with mutations in lag1.\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond342:constant_0.32_mM_H2O2_(100_min)_redo\n Cond175:swi4\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond319:37C_to_25C_shock_-_90_min\n Cond314:Heat_Shock_060_minutes__hs-2\n Cond738:90\n Cond876:zero2\n Cond401:Nitrogen_Depletion_1_d\n Cond885:20\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mTOS11:Hypothetical ORF,,\n Cond891:G1MMS\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond560:alpha63\n Cond555:alpha28\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mSRL1:Suppressor of rad53 lethality,,\n Cond347:1_mM_Menadione_(30_min)_redo\n mERV25:COPII coat component of certain ER-derived vesicles,vesicle \ncoat component,Null mutant is viable, displays a selective d\nefect in transport of secretory proteins from the ER to Golg\ni complex.\n Cond438:DBYyap1_+_37degree_heat_(repeat)\n mYJL178C:Unknown ,, Unknown\n mSCW10:Soluble Cell Wall protein,soluble cell wall protein,Null mut\nant is viable.\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond551:alpha0\n Cond665:mec1_plus_gamma_30_min\n Cond939:4h\n Cond884:10\n
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Computational Genomics Lab, Tel-Aviv uniresity