Module number 2287




Database revision : gnsdb28.10
Date : Tue Feb 25 17:15:22 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n Cond663:mec1_plus_gamma_10_min\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond399:Nitrogen_Depletion_8_h\n Cond432:YPD_stationary_phase_22_d_ypd-1\n mRPP1A:Homology to rat P1, human P1, and E.coli L12eIIA,acidic ribo\nsomal protein P1A (YP1alpha) (A1),\n Cond407:diauxic_shift_timecourse11.5_\n Cond829:tlc1_Expt.2_Passage_1\n Cond418:YPD_1_d_ypd-2\n Cond95:mac1\n Cond362:dtt_000_min__dtt-2\n Cond400:Nitrogen_Depletion_12_h\n Cond185:ubr2\n mRKI1:Ribose-5-phosphate ketol-isomerase,ribose-5-phosphate ketol-\nisomerase,Null mutant is inviable\n mASP1:Asparaginase I, intracellular isozyme,asparaginase I , intra\ncellular isozyme,Aspartic acid requiring\n Cond467:steady_state_21_dec_C_ct-2\n Cond883:5\n Cond416:YPD_10_h__ypd-2\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond364:dtt_030_min__dtt-2\n mDYS1:Deoxyhypusine synthase carries out the first step in hypusin\ne biosynthesis, converting lysine and spermidine into deoxyh\nypusine.,deoxyhypusine synthase,Null mutant is inviable\n Cond81:hog1(haploid)\n Cond454:YP_fructose_vs_reference_pool_car-2\n Cond890:G1\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond724:t4+SSD1,H44\n Cond:\n Cond435:DBYmsn2-4-_37degree_heat_-_20_min\n Cond814:Na+FK45'\n Cond310:Heat_Shock_000_minutes_hs-2\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond200:yel001c\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond897:STATMMS\n Cond718:t4+SSD1wt\n Cond894:G2\n Cond395:Nitrogen_Depletion_30_min.\n Cond704:gal80-gal\n Cond279:ERG11(tetpromoter)\n Cond830:tlc1_Expt.2_Passage_2\n Cond404:Nitrogen_Depletion_5_d\n mYPL246C:Unknown ,, Unknown\n Cond61:fks1(haploid)\n Cond216:yer044c(haploid)\n mRTN1:Unknown ,, Unknown\n Cond849:120_min\n Cond430:YPD_stationary_phase_7_d_ypd-1\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond848:90_min\n Cond879:MMC\n mYLR413W:Unknown ,, Unknown\n Cond708:t0+SSD1\n Cond481:WT+/-100mM3AT(SetB)(491)\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mIMD3:Hypothetical ORF,IMP dehydrogenase homolog,\n Cond427:YPD_stationary_phase_2_d_ypd-1\n Cond170:ste20(**11)\n Cond662:mec1_plus_gamma_5_min\n Cond26:cka2\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mCYS3:cystathionine gamma-lyase,cystathionine gamma-lyase,Null mut\nant is viable, cysteine auxotroph\n mRPS2:Homology to rat S2 and E. coli S5,ribosomal protein S2 (S4) \n(rp12) (YS5),Omnipotent suppressor of nonsense mutations\n Cond91:kim4\n mASC1:WD repeat protein (G-beta like protein) that interacts with \nthe translational machinery,G-beta like protein,Null mutant \nis viable. Null mutation suppresses the absence of growth of\n a cyp1- strain in anaerobiosis and also causes delayed grow\nth in aerobic or heme sufficient conditions; trp auxotrophs \nof the asc1 null allele are cold sensitive for growth; other\n mutants have increased cell size\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond942:SK1ume6_YPD\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond891:G1MMS\n Cond881:4NQO\n mACT1:Involved in cell polarization, endocytosis and other cytoske\nletal functions,actin,Null mutant is inviable; ts mutants sh\now osmosensitivity and defects in actin organization at non-\npermissive temp.; overproduction is lethal\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n mSEC61:membrane component of ER protein translocation apparatus,,Nu\nll mutant is inviable. Conditional alleles are defective for\n protein translocation and the export of misfolded proteins \nfrom the endoplasmic reticulum at the restrictive temperatur\ne.\n mAPT1:Adenine phosphoribosyltransferase,adenine phosphoribosyltran\nsferase,\n Cond438:DBYyap1_+_37degree_heat_(repeat)\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond664:mec1_plus_gamma_20_min\n Cond397:Nitrogen_Depletion_2_h\n Cond390:aa_starv_0.5_h\n mNOP1:nucleolar protein, homologous to mammalian fibrillarin,nucle\nolar protein , similar to mammalian fibrillarin,Null mutant \nis inviable. Temperature-sensitive alleles exhibit various d\nefects in rRNA processing.\n Cond396:Nitrogen_Depletion_1_h\n Cond896:STAT\n mHCR1:High Copy suppressor of RPG1,,viable\n Cond130:rml2(**13)\n Cond93:kre1\n Cond941:SK1_YPD\n Cond280:FKS1(tetpromoter)\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond140:rps24a(**9)\n Cond28:cla4(haploid)\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt. Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond872:Zero1\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond889:4NQO_2\n Cond947:W303_YPA\n Cond285:RHO1(tetpromoter)\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond420:YPD_3_d_ypd-2\n mYPR114W:Unknown ,, Unknown\n Cond893:SMMS\n mERV46:ER vesicle protein of 46 kDa,ER-Golgi transport vesicle prot\nein,Null mutant is viable but cold sensitive.\n mUTH1:Youth, involved in determining yeast longevity,,extension of\n yeast lifespan\n Cond317:37C_to_25C_shock_-_45_min\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n RapamycinDip.dip_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins. Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Cond419:YPD_2_d_ypd-2\n Cond878:MNNG\n Cond139:rpl8a\n Cond882:zero3\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond134:rpl12a\n Cond417:YPD_12_h_ypd-2\n Cond256:ymr141c\n Cond946:W303ume6_YPD\n Cond886:g-ray\n Cond62:fpr1\n mDPM1:dolichol phosphate mannose synthase,dolichol phosphate manno\nse synthase,Null mutant is inviable\n Cond403:Nitrogen_Depletion_3_d\n Cond319:37C_to_25C_shock_-_90_min\n Cond284:PMA1(tetpromoter)\n Cond182:tup1(haploid)\n Cond402:Nitrogen_Depletion_2_d\n Cond723:t2-SSD1,M31\n Cond876:zero2\n Cond283:KAR2(tetpromoter)\n Cond401:Nitrogen_Depletion_1_d\n mRPL4B:Highly similar to ribosomal protein L4A,ribosomal protein L4\nB (L2B) (rp2) (YL2),\n Cond885:20\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond103:msu1\n mSUR4:Required for conversion of 24-carbon fatty acids to 26-carbo\nn species,,Null mutants is viable, not sensitive to UV or ga\nmma radiation. sur4 mutants suppress rad3, rvs161 delta, and\n rvs167 mutations. sur4 fen1 mutants and sur4 elo2 mutants a\nre inviable.\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Calcin.NaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond421:YPD_5_d_ypd-2\n Cond655:wt_plus_gamma_60_min\n Cond428:YPD_stationary_phase_3_d_ypd-1\n Cond665:mec1_plus_gamma_30_min\n Stress.tempsteady:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond884:10\n Cond436:DBYmsn2/4_(real_strain)_+_37degrees_(20_min)\n
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Computational Genomics Lab, Tel-Aviv uniresity