Module number 2232




Database revision : gnsdb28.10
Date : Tue Feb 25 17:06:24 2003
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PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function. J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Cond698:gal3-gal\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond896:STAT\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Cond535:tec1D+50nMaF/wt+50nMaF,120minlog10(intensity)\n Cond744: Cond649:dun1-_+_0.02%_MMS_-_120_min\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond410:diauxic_shift_timecourse_18.5_h\n Cond418:YPD_1_d_ypd-2\n Cond137:rpl34a(**9)\n Cond941:SK1_YPD\n Cond648:dun1-_+_0.02%_MMS_-_90_min\n Cond647:dun1-_+_0.02%_MMs_-_30_min\n Cond834:tlc1_Expt.2_Passage_6\n Cond657:wt_plus_gamma_120_min\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond414:YPD_6_h_ypd-2\n Cond140:rps24a(**9)\n Cond892:S\n Cond883:5\n Cond416:YPD_10_h__ypd-2\n Cond447:ethanol_vs._reference_pool_car-1\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond289:Cycloheximide\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond822:tlc1_Expt.1_Passage_3\n Cond454:YP_fructose_vs_reference_pool_car-2\n Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond832:tlc1_Expt.2_Passage_4\n Cond457:YP_mannose_vs_reference_pool_car-2\n Cond426:YPD_stationary_phase_1_d_ypd-1\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mCOX4:subunit IV of cytochrome c oxidase,cytochrome c oxidase subu\nnit IV,Null mutant is viable and unable to grow on nonfermen\ntable carbon sources\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond966:swi1,_YPD_(a)\n Cond638:DES460_+_0.02%_MMS_-_90_min\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond897:STATMMS\n Cond937:t=0\n Cond753: Stress.WeakHeat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond704:gal80-gal\n Cond705:gal1gal10+gal\n Cond420:YPD_3_d_ypd-2\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond857:pm38-gtoe\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond357:2.5mM_DTT_045_min_dtt-1\n Cond935:10h\n Cond749: Cond449:glucose_vs._reference_pool_car-1\n Cond689:gal3+gal\n Cond646:DES459_(mec1-)_+_0.02%_MMS_-_120_min\n Cond452:sucrose_vs._reference_pool_car-1\n Cond693:gal7+gal\n Cond849:120_min\n Cond694:gal10+gal\n Cond430:YPD_stationary_phase_7_d_ypd-1\n RapamycinDip.dip_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins. Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n mCOX13:Modulates cytochrome c oxidase activity,cytochrome c oxidase\n subunit VIa , may specifically interact with ATP,Null mutan\nt is viable, shows slightly reduced growth rate on nonfermen\ntable carbon sources\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Cond450:mannose_vs._reference_pool__car-1\n Cond419:YPD_2_d_ypd-2\n Cond367:dtt_240_min_dtt-2\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond844:expt7\n Cond431:YPD_stationary_phase_13_d_ypd-1\n Cond895:G2MMS\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond879:MMC\n mYPR151C:Unknown ,, Unknown\n Cond835:tlc1_Expt.2_Passage_7\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mCIT3:Mitochondrial isoform of citrate synthase,citrate synthase,N\null mutant shows severely reduced growth on the respiratory \nsubstrate glycerol in a delta cit1 background\n Cond644:DES459_(mec1-)_+_0.02%_MMS_-_60_min\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond877:MMS\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n mACS1:one of 2 acetyl-coA synthetases in yeast,acetyl CoA syntheta\nse,Null mutant is viable and grows on ethanol or glucose (bu\nt not acetate) as sole carbon source (but with long lag-phas\ne); acs1 acs2 double null mutant is inviable\n Cond875:60min\n Cond427:YPD_stationary_phase_2_d_ypd-1\n Cond642:DES459_(mec1-)_+_0.02%_MMS_-_30_min\n Cond417:YPD_12_h_ypd-2\n Cond171:ste24(haploid)\n Cond838:expt1\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond945:W303_YPD\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mYNG1:Yeast homolog of mammalian Ing1,histone acetyltransferase co\nmplex component,carbon source sensitive, heat shock sensitiv\ne\n Cond415:YPD_8_h_ypd-2\n Cond874:30min\n Cond685:wt-gal\n Cond833:tlc1_Expt.2_Passage_5\n Cond687:gal1+gal\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond682:MHY1_(crt1)_vs_CRY1_(wild_type)\n Cond645:DES459_(mec1-)_+_0.02%_MMS_-_90_min\n Cond327:29C_to_33C_-_30_minutes\n Cond411:diauxic_shift_timecourse_20.5_h\n Cond859:ms221-30\n Cond754: Cond453:YP_ethanol_vs_reference_pool_car-2\n Cond690:gal4+gal\n Cond636:DES460_+_0.2%_MMS_-_45_min\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Cond421:YPD_5_d_ypd-2\n Cond428:YPD_stationary_phase_3_d_ypd-1\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond958:t0.5_g/r_ratio\n Cond884:10\n
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Computational Genomics Lab, Tel-Aviv uniresity