Module number 2231




Database revision : gnsdb28.10
Date : Tue Feb 25 17:06:12 2003
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Cond72:gpa2\n Cond458:YP_raffinose_vs_reference_pool_car-2\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n mERG13:involved in mevalonate synthesis,3-hydroxy-3-methylglutaryl \ncoenzyme A synthase,\n Cond896:STAT\n Cond649:dun1-_+_0.02%_MMS_-_120_min\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond137:rpl34a(**9)\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond648:dun1-_+_0.02%_MMS_-_90_min\n Cond647:dun1-_+_0.02%_MMs_-_30_min\n Cond834:tlc1_Expt.2_Passage_6\n Y-Stre.msn2/4acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond892:S\n Cond883:5\n Cond416:YPD_10_h__ypd-2\n Cond15:bim1(**15)\n Cond447:ethanol_vs._reference_pool_car-1\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond898:RPN4\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond454:YP_fructose_vs_reference_pool_car-2\n Cond409:diauxic_shift_timecourse_15.5_h\n Cond832:tlc1_Expt.2_Passage_4\n Cond889:4NQO_2\n Cond426:YPD_stationary_phase_1_d_ypd-1\n Cond457:YP_mannose_vs_reference_pool_car-2\n mCOX4:subunit IV of cytochrome c oxidase,cytochrome c oxidase subu\nnit IV,Null mutant is viable and unable to grow on nonfermen\ntable carbon sources\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond805:Ca/Ca+FK30'\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond638:DES460_+_0.02%_MMS_-_90_min\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond897:STATMMS\n Cond888:MNNG_2\n Cond894:G2\n Cond635:DES460_+_0.02%_MMS_-_30_min\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond893:SMMS\n mCYC1:iso-1-cytochrome c,iso-1-cytochrome c,Cytochrome c deficienc\ny\n Cond935:10h\n Cond749: Cond449:glucose_vs._reference_pool_car-1\n Cond902:(77i1)_HBY4_YPGL_NormInt\n Cond646:DES459_(mec1-)_+_0.02%_MMS_-_120_min\n Cond452:sucrose_vs._reference_pool_car-1\n Cond569:cdc15_10\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Cond694:gal10+gal\n Cond490:PHO81c_vs_WT_exp2_\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n mCOX13:Modulates cytochrome c oxidase activity,cytochrome c oxidase\n subunit VIa , may specifically interact with ATP,Null mutan\nt is viable, shows slightly reduced growth rate on nonfermen\ntable carbon sources\n Cond450:mannose_vs._reference_pool__car-1\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond895:G2MMS\n Cond825:tlc1_Expt.1_Passage_6\n mNDE1:Unknown ,, Unknown\n mYPR151C:Unknown ,, Unknown\n Cond835:tlc1_Expt.2_Passage_7\n Cond456:YP_glucose_vs_reference_pool_car-2\n mYHR214W:Unknown ,, Unknown\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond644:DES459_(mec1-)_+_0.02%_MMS_-_60_min\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond877:MMS\n Cond875:60min\n Cond427:YPD_stationary_phase_2_d_ypd-1\n Cond642:DES459_(mec1-)_+_0.02%_MMS_-_30_min\n Cond417:YPD_12_h_ypd-2\n mSNO3:SNZ3 proximal ORF, stationary phase induced gene family,,Nul\nl mutant is viable.\n Cond117:pfd2(**14)\n Cond945:W303_YPD\n Cond779:msn2/4_acid_20'\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mCOX5A:One of two genes (COX5A and COX5B, both nuclear-encoded) cod\ning for subunit V of cytochrome c oxidase; COX5A gene produc\nt is the predominantform of subunit V found in holocytochrom\ne c oxidase under normal growth conditions,cytochrome c oxid\nase chain Va,Null mutant is viable, respires at 10-15% of th\ne wild-type rate due to the presence of COX5B; cox5a cox5b d\nouble deletion mutants are completely non-respiratory\n mYNG1:Yeast homolog of mammalian Ing1,histone acetyltransferase co\nmplex component,carbon source sensitive, heat shock sensitiv\ne\n Cond415:YPD_8_h_ypd-2\n Cond833:tlc1_Expt.2_Passage_5\n Cond682:MHY1_(crt1)_vs_CRY1_(wild_type)\n Cond230:yhr022c\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis. Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Cond645:DES459_(mec1-)_+_0.02%_MMS_-_90_min\n Calcin.Ca/Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond891:G1MMS\n Cond411:diauxic_shift_timecourse_20.5_h\n Cond453:YP_ethanol_vs_reference_pool_car-2\n mQCR2:40 kDa ubiquinol cytochrome-c reductase core protein 2,40 kD\na ubiquinol cytochrome-c reductase core protein 2,Null mutan\nt is viable and grows slowly on glycerol\n Cond881:4NQO\n Cond570:cdc15_30\n Cond636:DES460_+_0.2%_MMS_-_45_min\n Cond639:DES460_+_0.02%_MMS_-_120_min\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Cond641:DES459_(mec1-)_+_0.02%_MMS_-_15_min\n Cond514:GAL-STE12,3hrs.gallog10(intensity)\n Cond428:YPD_stationary_phase_3_d_ypd-1\n mCYT1:Cytochrome c1,cytochrome c1,\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n mYGR182C:Unknown ,, Unknown\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond884:10\n
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Computational Genomics Lab, Tel-Aviv uniresity