Module number 2194




Database revision : gnsdb28.10
Date : Tue Feb 25 17:13:12 2003
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Cond217:yer050c\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Cond649:dun1-_+_0.02%_MMS_-_120_min\n Cond407:diauxic_shift_timecourse11.5_\n Cond388:Hypo-osmotic_shock_-_60_min\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond913:(99i3)_S150-2B_YPD_NormInt\n Cond648:dun1-_+_0.02%_MMS_-_90_min\n Stress.diamide:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond556:alpha35\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond573:cdc15_80\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Cond713:t4+Vec\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n Cond335:constant_0.32_mM_H2O2_(10_min)_redo\n Cond894:G2\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond216:yer044c(haploid)\n Cond356:2.5mM_DTT_030_min_dtt-1\n Cond914:(99i2)_S150-2B_YPGL+G_NormInt\n Cond580:cdc15_150\n Cond851:15_min\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond879:MMC\n Cond908:(83i2)_HBY4_YPGL_NormInt\n Stress.Heat1:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond54:erg3(haploid)\n Cond644:DES459_(mec1-)_+_0.02%_MMS_-_60_min\n Cond972:anc1\n Cond358:2.5mM_DTT_060_min_dtt-1\n Cond9:ard1\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond945:W303_YPD\n Cond80:hmg1(haploid)\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond634:DES460_+_0.02%_MMS_-_15_min\n SSD1.ANC1: Cond714:t0+SSD1wt\n Cond645:DES459_(mec1-)_+_0.02%_MMS_-_90_min\n Cond821:tlc1_Expt.1_Passage_2\n Cond742: Cond903:(77i2)_S150-2B_YPGL_NormInt\n Cond659:DES460_(wt)_-_mock_irradiation_-_30_min\n Cond636:DES460_+_0.2%_MMS_-_45_min\n Cond639:DES460_+_0.02%_MMS_-_120_min\n Cond650:wt_plus_gamma_5_min\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Cond347:1_mM_Menadione_(30_min)_redo\n Cond750: Cond801:CaFK15'\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond281:HMG2(tetpromoter)\n mERG11:cytochrome P450 lanosterol 14a-demethylase,cytochrome P450 l\nanosterol 14a-demethylase,Null mutant is inviable, erg11 nul\nl inviability is suppressed by deletion of ERG3; erg11 mutan\nts are ergosterol biosynthesis defective; many are also nyst\natin resistant\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins. Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond741: Cond301:Heat_Shock_10_minutes_hs-1\n Calcin.CaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond711:t2+Vec\n Cond780:Peroxide_10'\n Cond670:DES459_(mec1)_-_mock_irradiation_-_5_min\n Cond440:DBYmsn2msn4_(good_strain)_+_0.32_mM_H2O2\n Cond971:swi1,_minimal_(d)_\n Cond782:Peroxide_40'\n Cond647:dun1-_+_0.02%_MMs_-_30_min\n Cond892:S\n mERG7:carries out complex cyclization step of squalene to lanoster\nol in sterol biosynthesis pathway,2,3-oxidosqualene-lanoster\nol cyclase,Null mutant is inviable\n mERG8:Involved in isoprene and ergosterol biosynthesis pathways,48\n kDa phosphomevalonate kinase,Null mutant is inviable\n Cond124:rad6(haploid)\n Cond386:Hypo-osmotic_shock_-_30_min\n Cond371:1.5_mM_diamide_(20_min)\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond53:erg2\n Cond719:t4-SSD1\n Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Y-Stre.Acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond940:6h\n Cond218:yer066c-a\n Cond812:Na+FK15'\n Cond638:DES460_+_0.02%_MMS_-_90_min\n Cond753: Cond937:t=0\n Cond635:DES460_+_0.02%_MMS_-_30_min\n Cond298:Terbinafine\n Cond857:pm38-gtoe\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond489:PHO81c_vs_WT_exp1\n Cond709:t0+Vec\n Cond768:Acid_60'\n Cond935:10h\n Cond646:DES459_(mec1-)_+_0.02%_MMS_-_120_min\n Cond557:alpha42\n Cond794:Intertic\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Stress.H202:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Y-Stre.Heat:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond431:YPD_stationary_phase_13_d_ypd-1\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond877:MMS\n Cond642:DES459_(mec1-)_+_0.02%_MMS_-_30_min\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond294:Itraconazole\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis. Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond107:ost3\n Cond348:1mM_Menadione_(40_min)_redo\n Cond295:Lovastatin\n Cond453:YP_ethanol_vs_reference_pool_car-2\n Cond721:t0-SSD1,M31\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Calcin.NaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond938:2h\n Y-Stre.Peroxide:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond641:DES459_(mec1-)_+_0.02%_MMS_-_15_min\n Cond671:DES459_(mec1)_-_mock_irradiation_-_30_min\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth. Nature. 2000 Jul 6;406(6791):90-4.\n Cond665:mec1_plus_gamma_30_min\n Cond436:DBYmsn2/4_(real_strain)_+_37degrees_(20_min)\n Cond703:gal10-gal\n
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Computational Genomics Lab, Tel-Aviv uniresity