Module number 146




Database revision : gnsdb28.10
Date : Tue Feb 25 17:25:16 2003
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Cond101:mrpl33\n Cond292:Glucosamine\n Cond102:mrt4\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond836:tlc1_Expt.2_Passage_8\n Cond944:SK1_ume6_YPA\n Cond248:ymr030w\n mYLR179C:Unknown ,, Unknown\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond829:tlc1_Expt.2_Passage_1\n Cond130:rml2(**13)\n Cond266:ynd1\n Cond121:qcr2(haploid)\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond670:DES459_(mec1)_-_mock_irradiation_-_5_min\n Cond280:FKS1(tetpromoter)\n Cond834:tlc1_Expt.2_Passage_6\n Cond185:ubr2\n Cond140:rps24a(**9)\n Cond105:nrf1\n mSIM1:(putative) invovled in control of DNA replication,,Null muta\nnt is viable; mutant allows an extra round of DNA replicatio\nn without mitosis\n Cond28:cla4(haploid)\n Cond967:swi1,_YPD_(c)\n Cond81:hog1(haploid)\n Cond505:wtħ50nMaF,120minlog10(intensity)\n mRRD1:Resistant to Rapamycin Deletion,,Null mutant is viable but s\nhows pleiotropic phenotypes (eg. caffeine and rapamycin resi\nstance, vanadate and calcium sensitivity, etc.); synthetic l\nethal with RRD2 (YPL152w)\n Cond300:Heat_Shock_05_minutes_hs-1\n Cond832:tlc1_Expt.2_Passage_4\n mMGA1:Mga1p shows similarity to heat shock transcription factor,si\nmilar to heat shock transcription factor,\n Cond310:Heat_Shock_000_minutes_hs-2\n Cond947:W303_YPA\n Cond668:mec1_plus_gamma_90_min\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond210:yer002w\n Cond200:yel001c\n Cond245:ymr014w\n Cond897:STATMMS\n Cond50:ecm34\n Cond937:t=0\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n Cond285:RHO1(tetpromoter)\n Cond961:t7_g/r_ratio\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond683:MHY1_(crt1)_vs._CRY1_(wild_type)_-_log_phase\n Cond61:fks1(haploid)\n Cond229:yhr011w(**14)\n Cond214:yer034w\n mDSK2:Required with RAD23 for duplication of the spindle pole body\n,ubiquitin-like protein,Null mutant is viable\n Cond273:yor078w\n Cond287:2-deoxy-D-glucose\n Cond215:yer041w\n UME6.ume6:The Ume6 regulon coordinates metabolic and meiotic gene expr\nession in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(2\n1):13431-6.\n Cond264:ymr285c\n Cond717:t2-SSD1\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond145:rts1\n Cond528:ste18D/wtlog10(intensity)\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond127:ras2(haploid)\n Cond139:rpl8a\n Cond278:CDC42(tetpromoter)\n Cond835:tlc1_Expt.2_Passage_7\n Stress.Heat1:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond640:DES459_(mec1-)_+_0.02%_MMS_-_5_min\n Cond134:rpl12a\n Cond58:erp2\n Cond52:erd1\n Cond666:mec1_plus_gamma_45_min\n Cond26:cka2\n mIMP2':Protein involved in nucleo-mitochondrial control of maltose,\n galactose and raffinose utilization,transcription factor,Nu\nll mutant is viable, Inability to grow on maltose, galactose\n and raffinose in respiratory-deficient conditions or in the\n presence of ethidium bromide and erythromycin; leaky phenot\nype on oxidizable carbon sources: sensitivity to heat shock \nand sporulation deficiency\n Cond219:yer067c-a\n mYLR177W:Unknown ,, Unknown\n Cond80:hmg1(haploid)\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mYPL247C:Unknown ,, Unknown\n mSDS24:Similar to S. pombe SDS23, suppresses DIS2, localized to the\n nucleus,,Null mutant is viable\n Cond108:pac2\n Cond205:yel033w\n mCYS3:cystathionine gamma-lyase,cystathionine gamma-lyase,Null mut\nant is viable, cysteine auxotroph\n Cond91:kim4\n Cond833:tlc1_Expt.2_Passage_5\n Cond153:sgs1\n Cond138:rpl6b\n Cond162:spf1\n Cond283:KAR2(tetpromoter)\n Cond251:ymr034c\n Cond905:(77i4)_S150-2B_YPGL+G__NormInt\n Cond103:msu1\n Cond831:tlc1_Expt.2_Passage_3\n Cond828:tlc1_Expt.1_Passage_9\n Cond968:swi1,_YPD_(d)\n Cond960:t5_g/r_ratio\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond161:sod1(haploid)\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond564:alpha91\n Cond160:sir4\n Cond521:fus3-K42Dħ50nMaF,30minlog10(intensity)\n Cond641:DES459_(mec1-)_+_0.02%_MMS_-_15_min\n Cond11:arg5,6\n Cond665:mec1_plus_gamma_30_min\n Cond837:tlc1_Expt.2_Passage_9__\n Cond40:dig1,dig2\n
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Computational Genomics Lab, Tel-Aviv uniresity