Module number 1328




Database revision : gnsdb28.10
Date : Tue Feb 25 17:02:21 2003
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Cond663:mec1_plus_gamma_10_min\n Cond217:yer050c\n Cond277:AUR1(tetpromoter)\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function. J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes. Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond399:Nitrogen_Depletion_8_h\n Cond494:wtħ5nMaF,30minlog10(intensity)\n Cond565:alpha98\n Cond578:cdc15_130\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Cond649:dun1-_+_0.02%_MMS_-_120_min\n Cond407:diauxic_shift_timecourse11.5_\n Cond418:YPD_1_d_ypd-2\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond362:dtt_000_min__dtt-2\n Cond913:(99i3)_S150-2B_YPD_NormInt\n Cond648:dun1-_+_0.02%_MMS_-_90_min\n Cond834:tlc1_Expt.2_Passage_6\n Cond657:wt_plus_gamma_120_min\n Cond579:cdc15_140\n Cond556:alpha35\n Cond573:cdc15_80\n Cond289:Cycloheximide\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Cond81:hog1(haploid)\n Cond822:tlc1_Expt.1_Passage_3\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond702:gal7-gal\n Cond696:gal1-gal\n Cond562:alpha77\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n Cond231:yhr031c\n Cond245:ymr014w\n Cond788:NaCl_60'\n Cond530:GAL-BNI1D,3hrs.gallog10(intensity)\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond268:yor009w\n Cond123:rad57\n Cond279:ERG11(tetpromoter)\n Cond404:Nitrogen_Depletion_5_d\n Cond59:erp4\n Cond569:cdc15_10\n Cond57:erg6\n Cond914:(99i2)_S150-2B_YPGL+G_NormInt\n Cond580:cdc15_150\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Cond367:dtt_240_min_dtt-2\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond908:(83i2)_HBY4_YPGL_NormInt\n Cond187:vac8\n Cond581:cdc15_160\n Cond572:cdc15_70\n Cond558:alpha49\n Cond293:HU\n Cond68:gas1\n Cond143:rrp6\n Cond52:erd1\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond582:cdc15_170\n Cond653:wt_plus_gamma_30_min\n Cond205:yel033w\n Cond833:tlc1_Expt.2_Passage_5\n mLAG1:YKL008C,,Null mutant is viable\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond162:spf1\n Cond691:gal5+gal\n Cond251:ymr034c\n Cond645:DES459_(mec1-)_+_0.02%_MMS_-_90_min\n Cond969:swi1,_minimal_(a)\n Cond206:yel044w\n mCTS1:Endochitinase,endochitinase,Null mutant is viable; exhibits \na defect in cell separation\n Cond66:fus3,kss1(haploid)\n Cond461:21_deg_growth_ct-1\n Cond845:expt8\n Cond570:cdc15_30\n Cond970:swi1,_minimal_(c)\n Cond639:DES460_+_0.02%_MMS_-_120_min\n Cond584:cdc15_190\n Cond564:alpha91\n Cond964:ndt80_delete_early_g/r_ratio\n Cond39:dig1\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond664:mec1_plus_gamma_20_min\n Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond368:dtt_480_min_dtt-2\n Cond292:Glucosamine\n Cond102:mrt4\n Cond3:aep2\n Cond462:25_deg_growth_ct-1\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts. Nat Genet\n. 2000 Dec;26(4):415-23.\n Calcin.CaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n. J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond29:clb2\n Cond130:rml2(**13)\n Cond654:wt_plus_gamma_45_min\n Cond824:tlc1_Expt.1_Passage_5\n Cond363:dtt_015_min_dtt-2\n Cond224:CMD1(tetpromoter)\n Cond971:swi1,_minimal_(d)_\n Cond800:CaFK5'\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond140:rps24a(**9)\n Cond99:med2(haploid)\n Cond519:rst1Drst2Dħ50nMaF,30minlog10(intensity)\n Cond669:mec1_plus_gamma_120_min\n Cond586:cdc15_210\n Cond28:cla4(haploid)\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond53:erg2\n Y-Stre.Acid:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond940:6h\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond832:tlc1_Expt.2_Passage_4\n Cond638:DES460_+_0.02%_MMS_-_90_min\n Cond531:GAL-PKC1-R398A,3hrs.gallog10(intensity)\n Cond937:t=0\n Cond6:anp1\n Cond566:alpha105\n mYKR103W:Unknown ,, Unknown\n Cond420:YPD_3_d_ypd-2\n Cond341:constant_0.32_mM_H2O2_(80_min)_redo\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond646:DES459_(mec1-)_+_0.02%_MMS_-_120_min\n Cond557:alpha42\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond273:yor078w\n Cond506:bni1Dħ50nMaF,60minlog10(intensity)\n Stress.H202:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Y-Stre.Heat:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond431:YPD_stationary_phase_13_d_ypd-1\n Cond762:Heat_45'\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae. Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond278:CDC42(tetpromoter)\n Cond139:rpl8a\n Cond43:dot4\n Cond197:yar014c\n Y-Stre.NaCl:Remodeling of yeast genome expression in response to environ\nmental changes. Mol Biol Cell. 2001 Feb;12(2):323-37.\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond460:17_deg_growth_ct-1\n Cond563:alpha84\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n Cond24:cem1\n Cond877:MMS\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n Science. 1998 Oct 23;282(5389):699-705.\n Cond132:rnr1(haploid**9)\n Cond37:cyt1\n Cond134:rpl12a\n Cond666:mec1_plus_gamma_45_min\n Cond175:swi4\n Cond342:constant_0.32_mM_H2O2_(100_min)_redo\n Stress.Sorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond823:tlc1_Expt.1_Passage_4\n Cond403:Nitrogen_Depletion_3_d\n Cond766:Acid_20'\n Cond153:sgs1\n Cond402:Nitrogen_Depletion_2_d\n Cond554:alpha21\n Stress.tempgrow:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond575:cdc15_100\n Cond283:KAR2(tetpromoter)\n Cond401:Nitrogen_Depletion_1_d\n Cond574:cdc15_90\n Cond103:msu1\n Cond265:ymr293c\n Cond560:alpha63\n Cond576:cdc15_110\n mDSE1:Hypothetical ORF,,\n mDSE2:Hypothetical ORF,,\n Cond968:swi1,_YPD_(d)\n Cond299:Tunicamycin\n Cond383:1M_sorbitol_-_120_min\n Cond274:yor080w(**3)\n Cond161:sod1(haploid)\n Cond174:ste7(haploid)\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion. Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond938:2h\n Cond559:alpha56\n Cond655:wt_plus_gamma_60_min\n Cond577:cdc15_120\n Cond428:YPD_stationary_phase_3_d_ypd-1\n mSCW11:Soluble Cell Wall protein,soluble cell wall protein,Null mut\nant is viable but exhibits defects in separation after divis\nion and displays flocculant growth.\n Cond551:alpha0\n Cond665:mec1_plus_gamma_30_min\n
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Computational Genomics Lab, Tel-Aviv uniresity