Module number 109




Database revision : gnsdb28.10
Date : Tue Feb 25 17:18:46 2003
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Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function. J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n mICL1:component of glyoxylate cycle,isocitrate lyase,Null mutant i\ns viable, fails to grow on ethanol as a carbon source\n mREG2:Possible regulatory subunit for the PP1 family protein phosp\nhatase Glc7p,,Null mutant is viable; reg1 reg2 double mutant\ns exhibit a severe growth defect (suppressed by loss-of-func\ntion mutation in snf1); overexpression of REG2 complements s\nlow-growth defect of a reg1 mutant but not the defects in gl\nycogen accumulation or glucose repression\n Cond163:ssn6(haploid)\n Cond698:gal3-gal\n mSPG1:Hypothetical ORF,,Null mutant is viable; SPG1 is required fo\nr long-term survival in YPD at 37 degrees C.\n Cond432:YPD_stationary_phase_22_d_ypd-1\n mSDH4:succinate dehydrogenase membrane anchor subunit,succinate de\nhydrogenase membrane anchor subunit,Null mutant is viable, r\netains ability to grow on rich glycerol media\n mHMS1:High-copy mep2 suppressor,myc-family transcription factor ho\nmolog,Null mutant is viable; multicopy expression suppresses\n the pseudohyphal defect of mep2/mep2 strains\n Cond410:diauxic_shift_timecourse_18.5_h\n Cond418:YPD_1_d_ypd-2\n mYAT2:The Yat2p protein shows significant homology with the known \ncarnitine acetyltransferase associated with the outer-mitoch\nondrial membrane, Yat1p, and also functions as a carnitine a\ncetyltransferase.,carnitine acetyltransferase,Null: viable. \nOther phenotypes: The cit2yat2 double mutant does not grow o\nn ethanol, glycerol and acetate in the presence of carnitine\n.\n Cond520:hog1Dą1Msorbitol,2hrslog10(intensity)\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns. J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond362:dtt_000_min__dtt-2\n Cond824:tlc1_Expt.1_Passage_5\n Cond730:hda1\n Cond834:tlc1_Expt.2_Passage_6\n Cond697:gal2-gal\n mYBL049W:Unknown ,, Unknown\n Stress.HypoOsmot:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mYFL030W:Unknown ,, Unknown\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mYMR322C:Unknown ,, Unknown\n Cond414:YPD_6_h_ypd-2\n Cond729:sin3\n Cond416:YPD_10_h__ypd-2\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Cond911:(83i5)_S150-2B_YPD_NormInt\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond364:dtt_030_min__dtt-2\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond454:YP_fructose_vs_reference_pool_car-2\n mYFL052W:Unknown ,, Unknown\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond310:Heat_Shock_000_minutes_hs-2\n Cond195:yap3\n Cond426:YPD_stationary_phase_1_d_ypd-1\n Cond457:YP_mannose_vs_reference_pool_car-2\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles. Science. 200\n0 Feb 4;287(5454):873-80\n mYMR206W:Unknown ,, Unknown\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond420:YPD_3_d_ypd-2\n Cond857:pm38-gtoe\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n Cond404:Nitrogen_Depletion_5_d\n Cond449:glucose_vs._reference_pool_car-1\n Cond689:gal3+gal\n mPCK1:phosphoenolpyruvate carboxylkinase,phosphoenolpyruvate carbo\nxylkinase,Null mutant is viable.\n Cond452:sucrose_vs._reference_pool_car-1\n mSTL1:sugar transporter-like protein,sugar transporter-like protei\nn,Null mutant is viable, no growth defects on galactose, man\nnose, maltose, or glycerol.\n Cond693:gal7+gal\n mYEL070W:Unknown ,, Unknown\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond694:gal10+gal\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Stress.HeatSorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond450:mannose_vs._reference_pool__car-1\n Cond871:yhe710-ss\n mYNR073C:Unknown ,, Unknown\n Cond419:YPD_2_d_ypd-2\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n mDAK2:dihydroxyacetone kinase,dihydroxyacetone kinase,Null mutant \nis viable and show no growth defect in normal medium; mutant\n lacking both dak1 and dak2 is sensitive to dihydroxyacetone\n during saline growth\n Cond844:expt7\n Cond431:YPD_stationary_phase_13_d_ypd-1\n mYER084W:Unknown ,, Unknown\n Cond405:Diauxic_Shift_Timecourse_-_0_h\n mODC1:Oxodicarboxylate carrier,mitochondrial 2-oxodicarboxylate tr\nansport protein,\n mYOR186W:Unknown ,, Unknown\n Cond688:gal2+gal\n Cond456:YP_glucose_vs_reference_pool_car-2\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond385:Hypo-osmotic_shock_-_15_min\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n mYLR312C:Unknown ,, Unknown\n Cond640:DES459_(mec1-)_+_0.02%_MMS_-_5_min\n Cond427:YPD_stationary_phase_2_d_ypd-1\n mNDI1:NADH dehydrogenase (ubiquinone),NADH dehydrogenase (ubiquino\nne),\n Cond417:YPD_12_h_ypd-2\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network. Science. 2001 May 4;292(5518\n):929-34.\n mUGX2:Product of gene unknown,,\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond823:tlc1_Expt.1_Passage_4\n Cond415:YPD_8_h_ypd-2\n mECM13:ExtraCellular Mutant,,A Tn3 insertion into this gene causes \nhypersensitivity to the cell surface polymer perturbing agen\nt calcofluor white.\n Cond685:wt-gal\n Cond182:tup1(haploid)\n mMAL33:Part of complex locus MAL3; nonfunctional in S288C, shows ho\nmology to both functional & nonfunctional MAL-activator prot\neins in other Sc strains & to other nonfunctional MAL-activa\ntor sequences from S288C (i.e. MAL33, YPR196W, & YFL052W),MA\nL-activator protein,Defective maltose fermentation\n mYHR087W:Unknown ,, Unknown\n Cond433:YPD_stationary_phase_28_d_ypd-1\n mYLR149C:Unknown ,, Unknown\n mPHO89:Probable Na+/Pi symporter,Na+/Pi symporter (putative),Null m\nutant is viable\n mPUT1:proline oxidase,proline oxidase,inability to use proline as \na nitrogen source\n mYKR105C:Unknown ,, Unknown\n mGSY1:Highly similar to GSY2. GSY2 is the predominantly expressed \nglycogen synthase,glycogen synthase (UDP-glucose-starch gluc\nosyltransferase),Null mutant is viable. Mutant lacking both \nGSY1 and GSY2 is viable but lacks glycogen synthase activity\n and glycogen deposition\n Cond334:29C_+1M_sorbitol_to_33C_+_*NO_sorbitol_-_30_minutes\n mPUT4:putative proline-specific permease,proline-specific permease\n (putative),inability to use proline as a nitrogen source\n mYER067W:Unknown ,, Unknown\n mCSR2:chs5 spa2 rescue; overexpression rescues the lethality of ch\ns5 spa2 at 37 degrees,,Null mutant is viable\n Cond411:diauxic_shift_timecourse_20.5_h\n Cond727:rpd3\n mIDP2:concerts isocitrate and NADP+ to 2-oxoglutarate, CO2, and NA\nDPH,NADP-dependent isocitrate dehydrogenase,Null mutant is v\niable\n Cond453:YP_ethanol_vs_reference_pool_car-2\n Cond845:expt8\n Cond690:gal4+gal\n mYMR251W:Unknown ,, Unknown\n Chromo.chromo:Genomewide studies of histone deacetylase function in yeast.\n Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13708-13.\n mHXT10:high-affinity hexose transporter,high affinity hexose transp\norter,\n Cond699:gal4-gal\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast. Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n mHXT13:high-affinity hexose transporter,high affinity hexose transp\norter,\n Cond133:rpd3(haploid)\n Cond421:YPD_5_d_ypd-2\n mHXT16:hexose transporter,hexose permease,\n Cond428:YPD_stationary_phase_3_d_ypd-1\n Cond703:gal10-gal\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes. Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n
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Computational Genomics Lab, Tel-Aviv uniresity