| ID | Symbol | Description | Aliases | Front Node |
| 3661 | IRF3 | interferon regulatory factor 3 | - | T |
| 89941 | RHOT2 | ras homolog gene family, member T2 | ARHT2, C16orf39, MIRO-2, RASL | T |
| 864 | RUNX3 | runt-related transcription factor 3 | AML2, CBFA3, PEBP2aC | T |
| 2778 | GNAS | GNAS complex locus | AHO, C20orf45, GNAS1, GNASXL, GPSA, GSA, GSP, NESP, NESP55, PHP1A, PHP1B, POH, XL2, XLalphas | T |
| 4205 | MEF2A | MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) | ADCAD1, RSRFC4, RSRFC9 | F |
| 1017 | CDK2 | cyclin-dependent kinase 2 | p33(CDK2) | F |
| 2314 | FLII | flightless I homolog (Drosophila) | FLI, FLIL, Fli1, MGC39265 | T |
| 7533 | YWHAH | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide | YWHA1 | T |
| 9063 | PIAS2 | protein inhibitor of activated STAT, 2 | MIZ1, PIASX-ALPHA, PIASX-BETA, SIZ2, miz | F |
| 2033 | EP300 | E1A binding protein p300 | p300 | F |
| 60 | ACTB | actin, beta | - | F |
| 8848 | TSC22D1 | TSC22 domain family 1 | DKFZp686O19206, MGC17597, TGFB1I4, TSC22 | T |
| 5469 | PPARBP | PPAR binding protein | CRSP1, CRSP200, DRIP205, DRIP230, MGC71488, PBP, PPARGBP, RB18A, TRAP220, TRIP2 | F |
| 90 | ACVR1 | activin A receptor, type I | ACTRI, ACVRLK2, ALK2, SKR1 | F |
| 10755 | RGS19IP1 | regulator of G-protein signalling 19 interacting protein 1 | C19orf3, GIPC, GLUT1CBP, Hs.6454, IIP-1, MGC15889, MGC3774, NIP, SEMCAP, SYNECTIIN, TIP-2 | T |
| 3973 | LHCGR | luteinizing hormone/choriogonadotropin receptor | LCGR, LGR2, LHR, hLHR | F |
| 54700 | RRN3 | RRN3 RNA polymerase I transcription factor homolog (yeast) | DKFZp566E104 | T |
| 6498 | SKIL | SKI-like | SNO, SnoA, SnoN | F |
| 4915 | NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | GP145-TrkB, TRKB | T |
| 9734 | HDAC9 | histone deacetylase 9 | DKFZp779K1053, HD7, HDAC, HDAC7, HDAC7B, HDAC9B, HDAC9FL, HDRP, KIAA0744, MITR | F |
| 29945 | ANAPC4 | anaphase promoting complex subunit 4 | APC4 | F |
| 84676 | TRIM63 | tripartite motif-containing 63 | FLJ32380, IRF, MURF1, MURF2, RNF28, SMRZ | F |
| 8904 | CPNE1 | copine I | COPN1, CPN1, MGC1142 | T |
| 64750 | SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | - | F |
| 6613 | SUMO2 | SMT3 suppressor of mif two 3 homolog 2 (yeast) | HSMT3, SMT3B, SMT3H2 | T |
| 3665 | IRF7 | interferon regulatory factor 7 | IRF-7H, IRF7A | T |
| 29882 | ANAPC2 | anaphase promoting complex subunit 2 | APC2 | T |
| 10549 | PRDX4 | peroxiredoxin 4 | AOE37-2 | T |
| 51433 | ANAPC5 | anaphase promoting complex subunit 5 | APC5, PDL-108 | F |
| 7048 | TGFBR2 | transforming growth factor, beta receptor II (70/80kDa) | HNPCC6, MFS2, RIIC, Tbeta | F |
| 7067 | THRA | thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) | AR7, EAR-7.1, EAR-7.2, EAR7, ERB-T-1, ERBA, ERBA-ALPHA, ERBA1, MGC000261, MGC43240, NR1A1, THRA1, THRA2, THRA3, TR-ALPHA-1, c-ERBA-1, c-ERBA-ALPHA-2 | F |
| 51434 | ANAPC7 | anaphase promoting complex subunit 7 | APC7 | F |
| 2100 | ESR2 | estrogen receptor 2 (ER beta) | 5p152, ER-BETA, ESR-BETA, ESRB, Erb, NR3A2 | F |
| 28952 | CXorf37 | chromosome X open reading frame 37 | JM1 | T |
| 8975 | USP13 | ubiquitin specific protease 13 (isopeptidase T-3) | ISOT3, IsoT-3 | T |
| 2034 | EPAS1 | endothelial PAS domain protein 1 | HIF2A, MOP2, PASD2 | T |
| 9133 | CCNB2 | cyclin B2 | HsT17299 | T |
| 79039 | DDX54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 | DP97, MGC2835 | T |
| 11065 | UBE2C | ubiquitin-conjugating enzyme E2C | UBCH10, dJ447F3.2 | T |
| 4086 | SMAD1 | SMAD, mothers against DPP homolog 1 (Drosophila) | BSP1, JV4-1, JV41, MADH1, MADR1 | F |
| 5996 | RGS1 | regulator of G-protein signalling 1 | 1R20, BL34, IER1, IR20 | F |
| 131034 | CPNE4 | copine IV | COPN4, CPN4, MGC15604 | F |
| 55683 | FLJ10081 | hypothetical protein FLJ10081 | KIAA1310 | T |
| 64682 | ANAPC1 | anaphase promoting complex subunit 1 | APC1, MCPR, TSG24 | T |
| 6233 | RPS27A | ribosomal protein S27a | CEP80, HUBCEP80, UBA80, UBCEP1 | T |
| 85417 | CCNB3 | cyclin B3 | - | T |
| 84232 | MAF1 | homolog of yeast MAF1 | DKFZp586G1123, MGC20332, MGC31779, MGC39758 | T |
| 10713 | USP39 | ubiquitin specific protease 39 | CGI-21, HSPC332, MGC75069, SAD1 | T |
| 10293 | TRIP | TRAF interacting protein | TRAIP | T |
| 865 | CBFB | core-binding factor, beta subunit | PEBP2B | T |
| 996 | CDC27 | cell division cycle 27 | APC3, D0S1430E, D17S978E, HNUC | F |
| 51053 | GMNN | geminin, DNA replication inhibitor | Gem | F |
| 9372 | ZFYVE9 | zinc finger, FYVE domain containing 9 | MADHIP, NSP, SARA, SMADIP | F |
| 10393 | ANAPC10 | anaphase promoting complex subunit 10 | APC10, DKFZP564L0562, DOC1 | F |
| 3009 | HIST1H1B | histone 1, H1b | H1, H1.5, H1F5 | T |
| 5052 | PRDX1 | peroxiredoxin 1 | MSP23, NKEFA, PAG, PAGA, PAGB, TDPX2 | T |
| 4088 | SMAD3 | SMAD, mothers against DPP homolog 3 (Drosophila) | DKFZP586N0721, DKFZp686J10186, HSPC193, HsT17436, JV15-2, MADH3, MGC60396, Smad 3 | T |
| 8881 | CDC16 | CDC16 cell division cycle 16 homolog (S. cerevisiae) | APC6 | F |
| 8878 | SQSTM1 | sequestosome 1 | PDB3, ZIP3, p60, p62 | F |