Module glucose_metabolism




Database revision : gnsdb28.10
Date : Fri Feb 28 01:36:31 2003
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PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function.  J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Cond541:fus3D+50nMaF,30min/wtlog10(intensity)\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes.  Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n mYKL153W:Unknown ,, Unknown\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response.  Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond829:tlc1_Expt.2_Passage_1\n Cond121:qcr2(haploid)\n Cond13:ase1(**12)\n mPDC1:pyruvate decarboxylase,pyruvate decarboxylase,undetectable p\nyruvate decarboxylase activity in pdc1pdc5 double mutants\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns.  J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond362:dtt_000_min__dtt-2\n Cond913:(99i3)_S150-2B_YPD_NormInt\n mPDC5:pyruvate decarboxylase,pyruvate decarboxylase,undetectable p\nyruvate decarboxylase activity in pdc1pdc5 double mutants\n Cond513:GAL-STE11-4,3hrs.gallog10(intensity)\n Stress.diamide:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond185:ubr2\n Cond105:nrf1\n Cond204:yel028w\n mENO1:enolase I,enolase I,Null mutant is viable\n Cond467:steady_state_21_dec_C_ct-2\n Cell Cycle.ko:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion.  Mol Biol Cell. 1998 Dec;9(12):3273-97.\n mENO2:enolase,enolase,Null mutant is inviable\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond364:dtt_030_min__dtt-2\n Cond843:expt6\n Cond822:tlc1_Expt.1_Passage_3\n Cond445:Msn4_overexpression\n Cond454:YP_fructose_vs_reference_pool_car-2\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond:\n mGPM1:converts 3-phosphoglycerate to 2-phosphoglycerate in glycoly\nsis,phosphoglycerate mutase,Required for sporulation\n Cond840:expt3\n Cond814:Na+FK45'\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond393:aa_starv_4_h\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles.  Science. 200\n0 Feb 4;287(5454):873-80\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond966:swi1,_YPD_(a)\n Cond480:WT+/-100mM3AT(SetA)(R491)\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n Cond279:ERG11(tetpromoter)\n Cond830:tlc1_Expt.2_Passage_2\n Cond910:(83i4)_S150-2B_YPGL+G_NormInt\n Cond61:fks1(haploid)\n Cond852:30_min\n Cond902:(77i1)_HBY4_YPGL_NormInt\n Cond216:yer044c(haploid)\n mADH1:Alcohol dehydrogenase,alcohol dehydrogenase,Null mutant is v\niable and sensitive to formaldehyde.\n Cond356:2.5mM_DTT_030_min_dtt-1\n Cond479:WT+/-100mM3AT(SetD)(R491)\n Cond569:cdc15_10\n Cond807:crz1/Ca30'\n Cond849:120_min\n Cond851:15_min\n Cond490:PHO81c_vs_WT_exp2_\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae.  Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond848:90_min\n Cond901:(11i2)_HBY4_YPGL_NormInt\n Cond879:MMC\n Cond54:erg3(haploid)\n Cond572:cdc15_70\n Cond422:YPD_stationary_phase_2_h_ypd-1\n Cond963:t11.5_g/r_ratio\n Cond818:crz1/Na30'\n Cond358:2.5mM_DTT_060_min_dtt-1\n Cond52:erd1\n Cond26:cka2\n Cond9:ard1\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond205:yel033w\n Cond687:gal1+gal\n Cond365:dtt_060_min_dtt-2\n Cond73:gyp1\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond959:t2_g/r_ratio\n Cond571:cdc15_50\n Cond282:IDI1(tetpromoter)\n Cond969:swi1,_minimal_(a)\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond975:WT_1_mM_1NaPP1\n Cond206:yel044w\n Cond366:dtt_120_min_dtt-2\n Calcin.crz1:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond828:tlc1_Expt.1_Passage_9\n Cond570:cdc15_30\n Cond960:t5_g/r_ratio\n Cond970:swi1,_minimal_(c)\n Cond584:cdc15_190\n Cond11:arg5,6\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond836:tlc1_Expt.2_Passage_8\n Cond978:pho85D_1_mM_1NaPP1_\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond982:pho85D_10_mM_1NaPP1_\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond369:1.5_mM_diamide_(5_min)\n mTPI1:triosephosphate isomerase,triosephosphate isomerase,Null mut\nant is viable.\n Cond585:cdc15_200\n Cond971:swi1,_minimal_(d)_\n Cond647:dun1-_+_0.02%_MMs_-_30_min\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond140:rps24a(**9)\n Cond99:med2(haploid)\n Cond447:ethanol_vs._reference_pool_car-1\n Cond586:cdc15_210\n Cond375:1.5_mM_diamide_(60_min)\n Cond967:swi1,_YPD_(c)\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt.  Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond880:BCNU\n Cond53:erg2\n Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond808:Na15'\n Cond355:2.5mM_DTT_015_min_dtt-1\n Cond940:6h\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond832:tlc1_Expt.2_Passage_4\n Cond820:tlc1_Expt.1_Passage_1\n Cond934:8h\n Cond285:RHO1(tetpromoter)\n Cond705:gal1gal10+gal\n Cond78:hir2\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond420:YPD_3_d_ypd-2\n Cond961:t7_g/r_ratio\n COMP.CH:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond180:top1(haploid)\n Cond672:DES459_(mec1)_-_mock_irradiation_-_60_min\n Cond466:steady_state_17_dec_C_ct-2\n Cond357:2.5mM_DTT_045_min_dtt-1\n Cond935:10h\n Cond229:yhr011w(**14)\n Cond271:yor051c(**14)\n mCDC19:Required for START A in the cell cycle and sporulation,pyruv\nate kinase,Null mutant is inviable. cdc19 mutants are pyruva\nte kinase deficient and show cell division cycle blocked at \n36 degrees C\n Cond354:2.5mM_DTT_005_min_dtt-1\n Cond317:37C_to_25C_shock_-_45_min\n Cond273:yor078w\n Cond350:1_mM_Menadione_(80_min)_redo\n RapamycinDip.dip_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond450:mannose_vs._reference_pool__car-1\n Cond424:YPD_stationary_phase_8_h_ypd-1\n Cond465:steady_state_15_dec_C_ct-2\n Cond431:YPD_stationary_phase_13_d_ypd-1\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae.  Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n mTDH1:Glyceraldehyde-3-phosphate dehydrogenase 1,glyceraldehyde-3-\nphosphate dehydrogenase 1,Null mutant is viable, tdh1 tdh2 a\nnd tdh1 tdh3 double mutants grow at wild type rates when eth\nanol is used as a carbon source\n mTDH2:glyceraldehyde 3-phosphate dehydrogenase,glyceraldehyde 3-ph\nosphate dehydrogenase,Null mutant is viable, grow poorly on \nglucose, grow as well as wild-type on ethanol media, tdh2 td\nh3 double deletion mutants are inviable\n mTDH3:Glyceraldehyde-3-phosphate dehydrogenase 3,glyceraldehyde-3-\nphosphate dehydrogenase 3,\n Cond456:YP_glucose_vs_reference_pool_car-2\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond841:expt4\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n  Science. 1998 Oct 23;282(5389):699-705.\n Cond359:2.5mM_DTT_090_min_dtt-1\n Cond134:rpl12a\n Cond642:DES459_(mec1-)_+_0.02%_MMS_-_30_min\n Cond256:ymr141c\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond806:crz1/Ca15'\n Cond415:YPD_8_h_ypd-2\n Cond250:ymr031w-a\n Cond284:PMA1(tetpromoter)\n Cond349:1_mM_Menadione_(50_min)redo\n Cond483:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp1\n Calcin.crz1Na:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond283:KAR2(tetpromoter)\n Cond360:2.5mM_DTT_120_min_dtt-1\n Cond974:WT_vs_F82G_2\n Cond707:gal4gal80-gal\n Cond984:pho85D_DMSO_24_hrs._vs._F82G_10_mM_1-Na_PP1_24_hrs._\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis.  Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Cond411:diauxic_shift_timecourse_20.5_h\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond351:1_mM_Menadione_(105_min)_redo\n Cond831:tlc1_Expt.2_Passage_3\n Calcin.Na:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond453:YP_ethanol_vs_reference_pool_car-2\n Cond815:Na+FK60'\n Cond968:swi1,_YPD_(d)\n Cond299:Tunicamycin\n Cond539:fus3Dtec1D/wtlog10(intensity)\n Cond442:DBYyap1-_+_0.3_mM_H2O2_(20_min)\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast.  Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion.  Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond938:2h\n Calcin.NaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond421:YPD_5_d_ypd-2\n Cond671:DES459_(mec1)_-_mock_irradiation_-_30_min\n Cond962:t9_g/r_ratio\n Cond665:mec1_plus_gamma_30_min\n Stress.tempsteady:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond549:clb2-2\n Cond958:t0.5_g/r_ratio\n
Cond626:DY1457_(wild_type)_3_mM_vs._61_nM_zinc_y13-121\n mBUD28:Hypothetical ORF,,Diploid null mutants exhibit random buddin\ng\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes.  Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond399:Nitrogen_Depletion_8_h\n mYLR339C:Unknown ,, Unknown\n mYKL153W:Unknown ,, Unknown\n mTKL1:Transketolase 1,transketolase 1,Null mutant is viable; growt\nh on fermentable carbon sources, but not gluconeogenic carbo\nn sources, is reduced; tkl1 tkl2 mutants are auxotrophic for\n aromatic amino acids\n Cond432:YPD_stationary_phase_22_d_ypd-1\n mGYP7:GTPase-activating protein,GTPase activating protein (GAP),Nu\nll mutant is viable\n Cond418:YPD_1_d_ypd-2\n Cond675:MHY1_(dun1)_+_heat_20_min\n mRPS0A:Homology to rat Sa,ribosomal protein S0A,Null mutant is viab\nle; yst1 (rps0a) yst2 (rps0b) double deletion mutant is invi\nable; yst1 (rps0a) mutants are defective for filamentous gro\nwth\n mYCR013C:Unknown ,, Unknown\n Cond362:dtt_000_min__dtt-2\n mRPS0B:Homology to rat Sa; closely related to mammalian p40/laminin\n receptor precursors (LRPs); required for translation and co\nntributes to the assembly and/or stability of the 40S riboso\nmal subunit,ribosomal protein S0B,Null mutant is viable with\n significant reduction in growth rate and change in distribu\ntion and make up of ribosomes; yst1 (rps0a) yst2 (rps0b) dou\nble mutant is inviable\n mBUD7:bud site selection,,Diploid-specific heterogenous bud site s\nelection\n Cond400:Nitrogen_Depletion_12_h\n mAAH1:adenine aminohydrolase (adenine deaminase),adenine aminohydr\nolase (adenine deaminase),Null mutant is viable\n Stress.diamide:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond697:gal2-gal\n mRPL24A:Homology to rat L24,ribosomal protein L24A (rp29) (YL21) (L3\n0A),Null mutant is viable.\n mMTD1:NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase,N\nAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase,Nu\nll mutant is viable, associated with loss of NAD-dependent 5\n,10-methylene-THF dehydrogenase activity and a purine requir\nement in some genetic backgrounds\n mRPL24B:Homology to rat L24,ribosomal protein L24B (rp29) (YL21) (L3\n0B),Null mutant is viable.\n mRPL17A:Homology to rat L17, human L17, and E. coli L22,ribosomal pr\notein L17A (L20A) (YL17),\n mRPL17B:Homology to rat L17, human L17, and E. coli L22,ribosomal pr\notein L17B (L20B) (YL17),\n Cond467:steady_state_21_dec_C_ct-2\n Cond416:YPD_10_h__ypd-2\n mENO2:enolase,enolase,Null mutant is inviable\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Cond674:DES459_(mec1)_+_heat_20_min\n Cond810:Na45'\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Calcin.NaNa:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond364:dtt_030_min__dtt-2\n Cond373:1.5_mM_diamide_(40_min)\n mRPS8A:Homology to mammalian S8,ribosomal protein S8A (S14A) (rp19)\n (YS9),\n Cond454:YP_fructose_vs_reference_pool_car-2\n Cond445:Msn4_overexpression\n Cond890:G1\n mRPS8B:Homology to mammalian S8,ribosomal protein S8B (S14B) (rp19)\n (YS9),\n mNOP13:Nucleolar Protein 13,,\n mRPS12:Homology to rat S12,ribosomal protein S12,\n mRPS13:Homology to rat S13,ribosomal protein S13 (S27a) (YS15),\n mGPM1:converts 3-phosphoglycerate to 2-phosphoglycerate in glycoly\nsis,phosphoglycerate mutase,Required for sporulation\n mYLR194C:Unknown ,, Unknown\n mRPS15:Homology to rat S15 and E. coli S19,ribosomal protein S15 (S\n21) (rp52) (RIG protein),\n Cond391:aa_starv_1_h\n mRPL6A:Homology to rat L6 and human L6,ribosomal protein L6A (L17A)\n (rp18) (YL16),\n Cond435:DBYmsn2-4-_37degree_heat_-_20_min\n mRPL6B:Homology to rat and human L6; involved initiation of protein\n synthesis,ribosomal protein L6B (L17B) (rp18) (YL16),Null m\nutant is viable, grows slower than wild-type. rpl6a rpl6b do\nuble mutants are inviable; rpl6 mutants are deficient in 60S\n ribosomal subunits relative to 40S subunits; 43S preinitiat\nion complexes accumulate in half-mer polyribosomes in the ab\nsence of sufficient 60S subunits.\n Cond814:Na+FK45'\n Cond310:Heat_Shock_000_minutes_hs-2\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond805:Ca/Ca+FK30'\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles.  Science. 200\n0 Feb 4;287(5454):873-80\n mRPP2A:Homology to rat P2, human P2, and E.coli L12eIB,60S acidic r\nibosomal protein P2A (L44) (A2) (YP2alpha),Null mutant is vi\nable\n mRPP2B:Homology to rat P2, human P2, and E.coli L12eIA,ribosomal pr\notein P2B (YP2beta) (L45),Null mutant is viable\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond318:37C_to_25C_shock_-_60_min\n Cond480:WT+/-100mM3AT(SetA)(R491)\n mRPS22A:Homology to rat S15a,ribosomal protein S22A (S24A) (rp50) (Y\nS22),\n mRPS22B:Homology to rat S15a,ribosomal protein S22B (S24B) (rp50) (Y\nS22),\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n mRPS1A:Homologous to rat S3A,ribosomal protein S1A (rp10A),\n mYOR385W:Unknown ,, Unknown\n Cond894:G2\n mRPS1B:Homologous to rat ribosomal protein S3A,ribosomal protein S1\nB (rp10B),\n Cond673:DES460_(wild_type)_+_heat_20_min\n Cond395:Nitrogen_Depletion_30_min.\n Cond704:gal80-gal\n Cond701:gal6-gal\n mSSZ1:DnaK homolog, interacts with Zuo1p (DnaJ homolog) to form a \nribosome-associated complex (RAC) that is bound to the ribos\nome via the Zuo1p subunit,HSP70 family,Null mutant is viable\n, cold sensitive; SSZ1 overexpression causes increased expre\nssion of some PDR genes\n Cond683:MHY1_(crt1)_vs._CRY1_(wild_type)_-_log_phase\n mRPL18A:Homology to rat ribosomal protein L18,ribosomal protein L18A\n (rp28A),\n Cond689:gal3+gal\n mRPL18B:Homology to rat ribosomal protein L18,ribosomal protein L18B\n (rp28B),\n Cond479:WT+/-100mM3AT(SetD)(R491)\n Cond693:gal7+gal\n Cond849:120_min\n Cond430:YPD_stationary_phase_7_d_ypd-1\n mRPS9A:Homology to rat S9 and E.coli S4,ribosomal protein S9A (S13)\n (rp21) (YS11),\n mRPS20:Homology to rat S20, human S20, Xenopus S22, and E. coli S10\n,ribosomal protein S20,Null mutant is inviable\n Cond361:2.5mM_DTT_180_min_dtt-1\n Cond367:dtt_240_min_dtt-2\n mRPL7A:Homology to rat L7 and E. coli L30,ribosomal protein L7A (L6\nA) (rp11) (YL8),Null mutant is viable; grows more slowly tha\nn wild-type\n mRPL7B:Homolog of mammalian ribosomal protein L7 and E. coli L30,ri\nbosomal protein L7B (L6B) (rp11) (YL8),Null mutant is viable\n; disruption of both RPL7A and RPL7B is lethal\n Cond879:MMC\n Cond313:Heat_Shock_030inutes__hs-2\n mRPL11A:Homology to rat L11 and E. coli L5,ribosomal protein L11A (L\n16A) (rp39A) (YL22),\n Stress.Heat1:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond481:WT+/-100mM3AT(SetB)(491)\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond422:YPD_stationary_phase_2_h_ypd-1\n Cond963:t11.5_g/r_ratio\n Cond818:crz1/Na30'\n Cond378:1M_sorbitol_-_15_min\n Cond427:YPD_stationary_phase_2_d_ypd-1\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Cond816:Na/Na+FK30'\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mZPR1:Involved in nucleolar function; similar to murine ZPR1 prote\nin,zinc finger protein,Null mutant is inviable\n Cond653:wt_plus_gamma_30_min\n mRPS2:Homology to rat S2 and E. coli S5,ribosomal protein S2 (S4) \n(rp12) (YS5),Omnipotent suppressor of nonsense mutations\n Cond687:gal1+gal\n mFBA1:aldolase,aldolase,Null mutant is viable, lacks aldolase enzy\nmatic activity and fails to grow in media containing as a ca\nrbon source metabolites of only one side of the aldolase rea\nction\n mRPS3:Homology to mammalian S3,ribosomal protein S3 (rp13) (YS3),N\null mutant is inviable\n mENB1:Siderophore transporter for enterobactin; AFT1 regulon,enter\nobactin transporter,Null mutants are viable but are unable t\no take up and utilize iron from enterobactin\n mRPS5:ribosomal small subunit protein homologous to mammalian S5 (\nhas approx. 70% identity with human, rat and hydrozoan S5). \nIt is the least basic of the non-acidic ribosomal proteins. \nIt is phosphorylated in yeast.,ribosomal protein S5 (S2) (rp\n14) (YS8),null is inviable; transcription of RPS5 is sensiti\nve to heat-shock and carbon source shift.\n Cond374:1.5_mM_diamide_(50_min)\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond959:t2_g/r_ratio\n Calcin.Ca/Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond965:ndt80_delete_mid_g/r_ratio_\n mRPL8A:Homolgous to human L7a, mouse L7a, and rat L7a,ribosomal pro\ntein L8A (rp6) (YL5) (L4A),Null mutant is viable, rpl4A rpl4\nB double mutant is inviable; deficient in maintenance of kil\nler\n Cond742: mRPL8B:Homology to human L7a, mouse L7a, rat L7a,ribosomal protein \nL8B (L4B) (rp6) (YL5),Null mutant is viable. rpl8a rpl8b mut\nants are inviable. The rpl8b allele, krb1, can suppress some\n mak mutations and represents a chromosomal rearrangement in\nvolving chromosome XII\n mNPT1:homology to bacterial nicotinate phosphoribosyl transferase,\n,\n Cond881:4NQO\n mRPL3:Homology to rat L3,ribosomal protein L3 (rp1) (YL1),Tricoder\nmin resistance\n mRPL12B:Homology to rat L12(a) and E. coli L11,ribosomal protein L12\nB (L15B) (YL23),Null mutant is viable.\n Cond813:Na+FK30'\n Cond303:Heat_Shock_20_minutes_hs-1\n mRPL5:Homology to rat ribosomal protein L5; required for assembly \nof stable 60S ribosomal subunits,ribosomal protein L5 (L1a)(\nYL3),Null mutant is inviable.\n Cond960:t5_g/r_ratio\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n mRPL34B:Homology to rat L34,ribosomal protein L34B,\n Cond438:DBYyap1_+_37degree_heat_(repeat)\n mRPL27A:Homology to mammalian L27,ribosomal protein L27A,\n mRPL1A:Homology to rat L10a, eubacterial L1, and archaebacterial L1\n; identical to S. cerevisiae L1B (Ssm2p),ribosomal protein L\n1A, forms part of the 60S ribosomal subunit,Null mutant is v\niable; shows double mutant lethality with rpl1b (ssm2b) null\n mutants\n mRPL1B:Homology to rat L10a, eubacterial L1, and archaebacterial L1\n; identical to S. cerevisiae L1A (Ssm1p),ribosomal protein L\n1B,\n Cond652:wt_plus_gamma_20_min\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond397:Nitrogen_Depletion_2_h\n Cond390:aa_starv_0.5_h\n mYPL277C:Unknown ,, Unknown\n Cond320:heat_shock_17_to_37,_20_minutes\n Cond316:37C_to_25C_shock_-_30_min\n Cond305:Heat_Shock_40_minutes_hs-1\n Cond396:Nitrogen_Depletion_1_h\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n mRPL9A:Homology to rat L9,ribosomal protein L9A (L8A) (rp24) (YL11)\n,\n mRPL20A:Homology to rat L18a,ribosomal protein L20A (L18A),\n mYDR417C:Unknown ,, Unknown\n mRPL20B:Homology to rat L18a,ribosomal protein L20B (L18B),\n mTPI1:triosephosphate isomerase,triosephosphate isomerase,Null mut\nant is viable.\n Cond363:dtt_015_min_dtt-2\n mRPS4A:Homology to rat S4 and human S4,ribosomal protein S4A (YS6) \n(rp5) (S7A),Null mutant is viable; rps4a rps4b double deleti\non is inviable\n mYMD8:similar to vanadate resistance protein Gog5,,\n mRPS4B:Homology to rat S4 and human S4,ribosomal protein S4B (YS6) \n(rp5) (S7B),\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond414:YPD_6_h_ypd-2\n Cond892:S\n Cond745: Cond967:swi1,_YPD_(c)\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond463:29_deg_growth_ct-1\n mRPL2B:Homology to rat L8 and E. coli L2,ribosomal protein L2B (L5B\n) (rp8) (YL6),\n Cond323:heat_shock_29_to_37,_20_minutes\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt.  Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond733: Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond872:Zero1\n Cond940:6h\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mOLE1:delta-9-fatty acid desaturase,delta-9-fatty acid desaturase,\nThe null mutant is inviable but can be rescued by addition o\nf unsaturarted fatty acids to the growth medium. Some allele\ns are temperature-sensitive for growth and show defective in\ntracellular mitochondrial movement atthe non- permissive tem\nperature.\n mCMK2:Calmodulin-dependent protein kinase,calmodulin-dependent pro\ntein kinase,Null mutant is viable, exhibits slow rate of spo\nre germination\n mYFR055W:Unknown ,, Unknown\n Cond426:YPD_stationary_phase_1_d_ypd-1\n mEFT2:translation elongation factor 2 (EF-2),translation elongatio\nn factor 2 (EF-2),Null mutant is viable (eft1 eft2 double mu\ntant is lethal)\n Cond531:GAL-PKC1-R398A,3hrs.gallog10(intensity)\n Cond437:DBYyap1-_37degree_heat_-_20_min_(redo)\n Cond532:GAL-RHO1-Q68H,3hrs.gallog10(intensity)\n mRPL21A:Homology to rat L21,ribosomal protein L21A,\n mRPL21B:Homology to rat L21,ribosomal protein L21B,\n Cond934:8h\n mRPL14A:Homology to mammalian L14,ribosomal protein L14A,\n Cond322:heat_shock_25_to_37,_20_minutes\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond420:YPD_3_d_ypd-2\n Cond961:t7_g/r_ratio\n mRPL38:Homology to rat L38,ribosomal protein L38,\n mYOR389W:Unknown ,, Unknown\n Cond379:1M_sorbitol_-_30_min\n mHXK2:Glucose phosphorylation,hexokinase II (PII) (also called hex\nokinase B),Null mutant is viable and can ferment fructose, b\nut fails to show glucose repression at SUC2, CYC1, GAL10. hx\nk1, hxk2 double null mutant cannot ferment fructose\n Cond354:2.5mM_DTT_005_min_dtt-1\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n RapamycinDip.dip_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond434:DBY7286_37degree_heat_-_20_min\n Cond419:YPD_2_d_ypd-2\n Cond321:heat_shock_21_to_37,_20_minutes\n Cond431:YPD_stationary_phase_13_d_ypd-1\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae.  Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n mTDH1:Glyceraldehyde-3-phosphate dehydrogenase 1,glyceraldehyde-3-\nphosphate dehydrogenase 1,Null mutant is viable, tdh1 tdh2 a\nnd tdh1 tdh3 double mutants grow at wild type rates when eth\nanol is used as a carbon source\n mTDH2:glyceraldehyde 3-phosphate dehydrogenase,glyceraldehyde 3-ph\nosphate dehydrogenase,Null mutant is viable, grow poorly on \nglucose, grow as well as wild-type on ethanol media, tdh2 td\nh3 double deletion mutants are inviable\n mTDH3:Glyceraldehyde-3-phosphate dehydrogenase 3,glyceraldehyde-3-\nphosphate dehydrogenase 3,\n Cond882:zero3\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n  Science. 1998 Oct 23;282(5389):699-705.\n Cond640:DES459_(mec1-)_+_0.02%_MMS_-_5_min\n Cond417:YPD_12_h_ypd-2\n mADE2:phosphoribosylamino-imidazole-carboxylase,phosphoribosylamin\no-imidazole-carboxylase,Null mutant is viable and requires a\ndenine. ade2 mutants are blocked at a stage in the adenine b\niosynthetic pathway that causes an intermediate to accumulat\ne in the vacuole; the intermediate gives the cell a red colo\nr.\n Stress.Sorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mABZ1:para-aminobenzoate synthase, PABA synthase,para-aminobenzoat\ne synthase (PABA synthase),Null mutant is viable and PABA au\nxotroph\n Cond415:YPD_8_h_ypd-2\n mRPS6A:Homology to rat, mouse, and human S6,ribosomal protein S6A (\nS10A) (rp9) (YS4),\n Cond319:37C_to_25C_shock_-_90_min\n mRPS6B:Homology to rat, human, and mouse S6,ribosomal gene product \nS6B (S10B) (rp9) (YS4),\n Cond685:wt-gal\n Cond811:Na60'\n Cond372:1.5_mM_diamide_(30_min)\n Cond876:zero2\n Stress.tempgrow:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Calcin.crz1Na:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Stress.HeatVar:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond732:fkh1,2_alpha_factor_000_min_y12n57\n Cond401:Nitrogen_Depletion_1_d\n mZUO1:Zuotin has region of DnaJ homology,zuotin, Z-DNA binding pro\ntein (putative),Null mutant has slow growth defect\n mRPL4B:Highly similar to ribosomal protein L4A,ribosomal protein L4\nB (L2B) (rp2) (YL2),\n mYLL044W:Unknown ,, Unknown\n Cond411:diauxic_shift_timecourse_20.5_h\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Calcin.Na:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond815:Na+FK60'\n Cond453:YP_ethanol_vs_reference_pool_car-2\n mGPD2:Involved in glycerol production via conversion of glyerol-3-\nphosphate and NAD+ to glycerol phosphate and NADH,glycerol-3\n-phosphate dehydrogenase (NAD+),Null mutant is viable\n mADE13:Adenylosuccinate Lyase,adenylosuccinate lyase,Unable to grow\n on complete media with glucose or fructose as a carbon sour\nce, but can grow with glycerol or ethanol\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast.  Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n mRPP0:Homology to rat P0, human P0, and E. coli L10e,ribosomal pro\ntein P0 (A0) (L10E),Null mutant is inviable\n Cond938:2h\n Calcin.NaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n mRPL16A:Homology to rat L13a,ribosomal protein L16A (L21A) (rp22) (Y\nL15),\n Cond421:YPD_5_d_ypd-2\n mRPL16B:Homology to rat ribosomal protein L13a,ribosomal protein L16\nB (L21B) (rp23) (YL15),\n Cond962:t9_g/r_ratio\n mYGR146C:Unknown ,, Unknown\n Cond428:YPD_stationary_phase_3_d_ypd-1\n Cond304:Heat_Shock_30_minutes_hs-1\n mHAL5:Protein kinase homolog, mutant is salt and pH sensitive,,\n mSCW10:Soluble Cell Wall protein,soluble cell wall protein,Null mut\nant is viable.\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth.  Nature. 2000 Jul 6;406(6791):90-4.\n mRPS7A:Homology to human S7 and Xenopus S8,ribosomal protein S7A (r\np30),Null mutant is viable\n Stress.tempsteady:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mRPS7B:Homology to human S7 and Xenopus S8,ribosomal protein S7B (r\np30),\n Cond958:t0.5_g/r_ratio\n Cond436:DBYmsn2/4_(real_strain)_+_37degrees_(20_min)\n
Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond141:rps24a(haploid)\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes.  Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n Cond907:(83i1)_S150-2B_YPGL_NormInt\n Cond978:pho85D_1_mM_1NaPP1_\n mTKL1:Transketolase 1,transketolase 1,Null mutant is viable; growt\nh on fermentable carbon sources, but not gluconeogenic carbo\nn sources, is reduced; tkl1 tkl2 mutants are auxotrophic for\n aromatic amino acids\n Cond798:Ca30'\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response.  Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n mTPI1:triosephosphate isomerase,triosephosphate isomerase,Null mut\nant is viable.\n mYCR013C:Unknown ,, Unknown\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns.  J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond913:(99i3)_S150-2B_YPD_NormInt\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond467:steady_state_21_dec_C_ct-2\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond890:G1\n Stress.DTT1:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond872:Zero1\n Cond940:6h\n Cond:\n mGPM1:converts 3-phosphoglycerate to 2-phosphoglycerate in glycoly\nsis,phosphoglycerate mutase,Required for sporulation\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mERG20:May be rate-limiting step in sterol biosynthesis pathway,far\nnesyl diphosphate synthetase (FPP synthetase),Null mutant is\n inviable\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond245:ymr014w\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond820:tlc1_Expt.1_Passage_1\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n mYOR385W:Unknown ,, Unknown\n Cond894:G2\n Cond934:8h\n Cond704:gal80-gal\n Cond420:YPD_3_d_ypd-2\n Cond961:t7_g/r_ratio\n mSAC6:fibrim homolog (actin-filament bundling protein),actin filam\nent bundling protein , fibrim homolog,suppressor of actin mu\ntations, abnormal actin structures, defective morphogenesis\n Cond672:DES459_(mec1)_-_mock_irradiation_-_60_min\n Cond357:2.5mM_DTT_045_min_dtt-1\n Cond852:30_min\n Cond902:(77i1)_HBY4_YPGL_NormInt\n Cond356:2.5mM_DTT_030_min_dtt-1\n Cond849:120_min\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Cond851:15_min\n RapamycinDip.dip_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond490:PHO81c_vs_WT_exp2_\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae.  Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond431:YPD_stationary_phase_13_d_ypd-1\n Cond456:YP_glucose_vs_reference_pool_car-2\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond422:YPD_stationary_phase_2_h_ypd-1\n Cond877:MMS\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n  Science. 1998 Oct 23;282(5389):699-705.\n Cond963:t11.5_g/r_ratio\n Cond359:2.5mM_DTT_090_min_dtt-1\n Cond799:Ca60'\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond365:dtt_060_min_dtt-2\n mRPS3:Homology to mammalian S3,ribosomal protein S3 (rp13) (YS3),N\null mutant is inviable\n Cond483:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp1\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond571:cdc15_50\n Cond959:t2_g/r_ratio\n Cond360:2.5mM_DTT_120_min_dtt-1\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis.  Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond366:dtt_120_min_dtt-2\n Cond960:t5_g/r_ratio\n Cond570:cdc15_30\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast.  Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cond274:yor080w(**3)\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion.  Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond938:2h\n Calcin.Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond421:YPD_5_d_ypd-2\n Cond671:DES459_(mec1)_-_mock_irradiation_-_30_min\n Cond962:t9_g/r_ratio\n Stress.tempsteady:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond958:t0.5_g/r_ratio\n
Cond350:1_mM_Menadione_(80_min)_redo\n Cond851:15_min\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function.  J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae.  Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n mHOM2:threonine and methionine pathway,aspartic beta semi-aldehyde\n dehydrogenase,Homoserine requiring\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n mYFR017C:Unknown ,, Unknown\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond829:tlc1_Expt.2_Passage_1\n mTDH3:Glyceraldehyde-3-phosphate dehydrogenase 3,glyceraldehyde-3-\nphosphate dehydrogenase 3,\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond841:expt4\n mTPI1:triosephosphate isomerase,triosephosphate isomerase,Null mut\nant is viable.\n Stress.Menadione:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond352:1_mM_Menadione_(120_min)redo\n mGDH3:Involved in glutamate biosynthesis,NADP-linked glutamate deh\nydrogenase,Null mutant is viable\n Stress.Sorbitol:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mENO1:enolase I,enolase I,Null mutant is viable\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond586:cdc15_210\n mTSL1:123 kD regulatory subunit of trehalose-6-phosphate synthase/\nphosphatase complex; homologous to TPS3 gene product,similar\n to TPS3 gene product , trehalose-6-phosphate synthase/phosp\nhatase complex 123 kDa regulatory subunit,Null mutant is via\nble\n Cond349:1_mM_Menadione_(50_min)redo\n Cond454:YP_fructose_vs_reference_pool_car-2\n Cond283:KAR2(tetpromoter)\n mYDR157W:Unknown ,, Unknown\n Cond808:Na15'\n Cond940:6h\n Cond:\n mHSP150:Heat shock protein, secretory glycoprotein,heat shock protei\nn , secretory glycoprotein , heat shock protein , secretory \nglycoprotein , heat shock protein , secretory glycoprotein,N\null mutant is viable\n Cond840:expt3\n mYDR154C:Unknown ,, Unknown\n mYKR043C:Unknown ,, Unknown\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond351:1_mM_Menadione_(105_min)_redo\n Cond346:1_mM_Menadione_(20_min)_redo\n mRPA14:14 kDa subunit of RNA polymerase I,RNA polymerase I subunit,\nNull mutant is viable but is temperature sensitive\n Calcin.Na:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n mCCW12:Hypothetical ORF,cell wall mannoprotein,Null mutant is viabl\ne and shows decrease in mating efficiency and defect in aggl\nutination\n Cond820:tlc1_Expt.1_Passage_1\n Cond937:t=0\n Cond934:8h\n Cond383:1M_sorbitol_-_120_min\n mCUE4:Unknown ,, Unknown\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion.  Mol Biol Cell. 1998 Dec;9(12):3273-97.\n Cond830:tlc1_Expt.2_Passage_2\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond671:DES459_(mec1)_-_mock_irradiation_-_30_min\n Cond852:30_min\n mADH1:Alcohol dehydrogenase,alcohol dehydrogenase,Null mutant is v\niable and sensitive to formaldehyde.\n Cond665:mec1_plus_gamma_30_min\n mCPR1:cyclophilin peptidyl-prolyl cis-trans isomerase,cyclophilin \n, peptidyl-prolyl cis-trans isomerase (PPIase) , cyclophilin\n , peptidyl-prolyl cis-trans isomerase (PPIase),Null mutant \nis viable\n mUTH1:Youth, involved in determining yeast longevity,,extension of\n yeast lifespan\n Cond345:1_mM_Menadione_(10_min)redo\n
Cond423:YPD_stationary_phase_4_h_ypd-1\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function.  J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Jelinski.Jelinski:Regulatory networks revealed by transcriptional profiling of\n damaged Saccharomyces cerevisiae cells: Rpn4 links base exc\nision repair with proteasomes.  Mol Cell Biol. 2000 Nov;20(2\n1):8157-67.\n mERG13:involved in mevalonate synthesis,3-hydroxy-3-methylglutaryl \ncoenzyme A synthase,\n Cond396:Nitrogen_Depletion_1_h\n mTKL1:Transketolase 1,transketolase 1,Null mutant is viable; growt\nh on fermentable carbon sources, but not gluconeogenic carbo\nn sources, is reduced; tkl1 tkl2 mutants are auxotrophic for\n aromatic amino acids\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Cond432:YPD_stationary_phase_22_d_ypd-1\n Cond407:diauxic_shift_timecourse11.5_\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response.  Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond410:diauxic_shift_timecourse_18.5_h\n Cond418:YPD_1_d_ypd-2\n Cond675:MHY1_(dun1)_+_heat_20_min\n mTPI1:triosephosphate isomerase,triosephosphate isomerase,Null mut\nant is viable.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns.  J Bacteriol\n. 2000 Sep;182(17):4970-8.\n Cond487:pho80_vs_WT\n Cond913:(99i3)_S150-2B_YPD_NormInt\n mYKL056C:Unknown ,, Unknown\n mERG1:Squalene monooxygenase,squalene monooxygenase,Null mutant is\n inviable when cells are grown under aerobic conditions; erg\n1 null mutants are viable under anaerobic conditions during \nwhich ergosterol is taken up by the cells\n mERG2:sterol biosynthesis,C-8 sterol isomerase,Null mutant is viab\nle\n Stress.YPD:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond414:YPD_6_h_ypd-2\n Cond425:YPD_stationary_phase_12_h_ypd-1\n Cond674:DES459_(mec1)_+_heat_20_min\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond898:RPN4\n Cond843:expt6\n Cond637:DES460_+_0.02%_MMS_-_60_min\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond445:Msn4_overexpression\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt.  Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond890:G1\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond872:Zero1\n Cond940:6h\n Cond:\n Cond814:Na+FK45'\n Cond310:Heat_Shock_000_minutes_hs-2\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n mADO1:adenosine kinase,adenosine kinase,\n Cond638:DES460_+_0.02%_MMS_-_90_min\n Cond429:YPD_stationary_phase_5_d_ypd-1\n Cond318:37C_to_25C_shock_-_60_min\n Cond437:DBYyap1-_37degree_heat_-_20_min_(redo)\n mACC1:acetyl-CoA carboxylase,acetyl CoA carboxylase,acc1 spores fa\nil to enter vegetative growth\n Cond894:G2\n Cond934:8h\n Cond704:gal80-gal\n Cond920:3h\n Cond459:YP_sucrose_vs_reference_pool_car-2\n Cond420:YPD_3_d_ypd-2\n Cond404:Nitrogen_Depletion_5_d\n Cond893:SMMS\n Cond709:t0+Vec\n Cond452:sucrose_vs._reference_pool_car-1\n Cond693:gal7+gal\n mYEF3:contains two ABC cassettes, and binds and hydrolyses ATP,Tra\nnslation elongation factor 3 (EF-3),Null mutant is inviable\n Cond914:(99i2)_S150-2B_YPGL+G_NormInt\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond430:YPD_stationary_phase_7_d_ypd-1\n Cond851:15_min\n Cond490:PHO81c_vs_WT_exp2_\n Cond419:YPD_2_d_ypd-2\n Cond895:G2MMS\n Cond405:Diauxic_Shift_Timecourse_-_0_h\n Cond879:MMC\n Cond481:WT+/-100mM3AT(SetB)(491)\n Stress.Heat2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond882:zero3\n Cond644:DES459_(mec1-)_+_0.02%_MMS_-_60_min\n Cond422:YPD_stationary_phase_2_h_ypd-1\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Cond877:MMS\n Cond427:YPD_stationary_phase_2_d_ypd-1\n mSEC53:involved in synthesis of GDP-mannose and dolichol-phosphate-\nmannose; required for protein assembly in endoplasmic reticu\nlum,phosphomannomutase,null is inviable; ts mutant is defect\nive in glycosylation, accumulating inactive and incompletely\n glycosylated forms of secretory proteins within the ER lume\nn\n Cond886:g-ray\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond403:Nitrogen_Depletion_3_d\n Cond250:ymr031w-a\n Cond319:37C_to_25C_shock_-_90_min\n mSAH1:putative S-adenosyl-L-homocysteine hydrolase,S-adenosyl-L-ho\nmocysteine hydrolase (putative),\n Cond402:Nitrogen_Depletion_2_d\n mFAS1:pentafunctional enzyme consisting of the following domains :\n acetyl transferase, enoyl reductase, dehydratase and malony\nl/palmityl transferase,acetyl transferase , dehydratase , en\noyl reductase , malonyl/palmityl transferase , pentafunction\nal enzyme,Null mutant is viable\n mFAS2:Trifunctional enzyme,fatty acid synthase alpha subunit,Fatty\n acid synthetase deficient\n Cond433:YPD_stationary_phase_28_d_ypd-1\n Cond483:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp1\n Cond876:zero2\n Cond401:Nitrogen_Depletion_1_d\n Cond885:20\n Cond984:pho85D_DMSO_24_hrs._vs._F82G_10_mM_1-Na_PP1_24_hrs._\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis.  Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n Cond645:DES459_(mec1-)_+_0.02%_MMS_-_90_min\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mPFK2:phosphofructokinase beta subunit,phosphofructokinase beta su\nbunit,Null mutant is viable but exhibits slow growth and dec\nreased efficiency of glucose utilization.\n Cond891:G1MMS\n Cond411:diauxic_shift_timecourse_20.5_h\n Stress.Various:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond453:YP_ethanol_vs_reference_pool_car-2\n Cond636:DES460_+_0.2%_MMS_-_45_min\n Cond639:DES460_+_0.02%_MMS_-_120_min\n Cond938:2h\n Cond643:DES459_(mec1-)_+_0.02%_MMS_-_45_min\n Calcin.NaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond421:YPD_5_d_ypd-2\n mRLI1:Strong protein homology (68% identical) to human RNase L Inh\nibitor (RLI),ATP-binding cassette (ABC) superfamily nontrans\nporter group (putative),Null mutant is inviable; overexpress\nion of RLI1 from a galactose-inducible promoter has a modera\nte inhibitory effect on growth.\n Cond428:YPD_stationary_phase_3_d_ypd-1\n mARC1:associated with tRNA and amino acyl-tRNA synthetases; has af\nfinity for quadruplex nucleic acids,,Null mutant is viable, \nleads to slow growth and reduced MetRS activity; arc1- mutan\nts are synthetic lethals and are complemented by the genes f\nor methionyl-tRNA and glutamyl-tRNA synthetase.\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond884:10\n

this is an automaticly generated GENESYS report
Computational Genomics Lab, Tel-Aviv uniresity