Module amino_acid_transport




Database revision : gnsdb28.10
Date : Fri Feb 28 01:36:31 2003
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Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond397:Nitrogen_Depletion_2_h\n Cond390:aa_starv_0.5_h\n Cond541:fus3D+50nMaF,30min/wtlog10(intensity)\n mGNP1:high-affinity glutamine permease,high affinity glutamine per\nmease,Null mutant is viable but shows reduced glutamine tran\nsport and is therefore resistant to the glutamine analog L-g\nlutamic acid gamma-monohydroxamate; overexpression induces s\nensitivity to heat shock\n Cond399:Nitrogen_Depletion_8_h\n Cond396:Nitrogen_Depletion_1_h\n Cond798:Ca30'\n mTIP1:cold- and heat-shock induced protein of the Srp1p/Tip1p fami\nly of serine-alanine-rich proteins,cell wall mannoprotein,Nu\nll mutant is viable; exhibits increased sensitivity to calco\nflour white and congo red\n mURA1:dihydroorotate dehydrogenase,dihydroorotate dehydrogenase,ur\nacil requiring\n mYLR413W:Unknown ,, Unknown\n Calcin.CaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond950:TPK1_MT1val\n Cond954:TPK2_MT2val\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n  Science. 1998 Oct 23;282(5389):699-705.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns.  J Bacteriol\n. 2000 Sep;182(17):4970-8.\n mMUP1:high affinity methionine permease,high affinity methionine p\nermease,Null mutant is viable but cannot perform high-affini\nty methionine update.\n Cond400:Nitrogen_Depletion_12_h\n TPK.TPK:The yeast A kinases differentially regulate iron uptake and \nrespiratory function.  Proc Natl Acad Sci U S A. 2000 May 23\n;97(11):5984-8.\n Cond26:cka2\n Cond190:vps8\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond403:Nitrogen_Depletion_3_d\n Cond140:rps24a(**9)\n Cond319:37C_to_25C_shock_-_90_min\n Cond909:(83i3)_HBY4_YPGL+G_NormInt\n Cond402:Nitrogen_Depletion_2_d\n Cond951:WT2val\n Cond394:aa_starv_6_h\n Cond398:Nitrogen_Depletion_4_h\n Cond959:t2_g/r_ratio\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt.  Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Cond401:Nitrogen_Depletion_1_d\n Cond802:CaFK30'\n Cond391:aa_starv_1_h\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond965:ndt80_delete_mid_g/r_ratio_\n mBAP2:contains 12 predicted transmembrane domains,amino acid perme\nase for leucine, valine, and isoleucine (putative),reduced u\nptake of leucine, isoleucine, and valine\n Cond474:gcn4D+/-100mM3AT(KNY124)\n mBAP3:branched-chain amino acid permease,valine transporter,\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles.  Science. 200\n0 Feb 4;287(5454):873-80\n Cond393:aa_starv_4_h\n Cond952:TPK1_MT2val\n mYER064C:Unknown ,, Unknown\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n mMDH2:cytosolic malate dehydrogenase,malate dehydrogenase,Null mut\nant is viable; fails to grow on minimal medium with acetate \nor ethanol as carbon source\n mCAR1:arginase,arginase,Null mutant is viable but defective in arg\ninine catabolism\n Cond956:TPK3_MT2val\n Cond395:Nitrogen_Depletion_30_min.\n mAGP1:broad substrate range permease which transports asparagine a\nnd glutamine with intermediate specificity,amino acid permea\nse,Null mutant is viable; resistant to the amino acid analog\n gamma-hydroxyaspartate, decreased growth on asn, gln and so\nme other amino acids in strains in which Gap1 and Gnp1 are a\nlso missing.\n Calcin.Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond404:Nitrogen_Depletion_5_d\n Cond392:aa_starv_2_h\n mTAT1:Amino acid transport protein for valine, leucine, isoleucine\n, and tyrosine,amino acid transport protein for valine, leuc\nine, isoleucine, and tyrosine,\n mTAT2:Tryptophan permease, high affinity,tryptophan permease, high\n affinity,suppressor of chromosome segregation mutation\n Cond953:TPK2_MT1val\n
Cond277:AUR1(tetpromoter)\n PEX.Pex:Transcriptome profiling to identify genes involved in peroxi\nsome assembly and function.  J Cell Biol. 2002 Jul 22;158(2)\n:259-71.\n Cond541:fus3D+50nMaF,30min/wtlog10(intensity)\n Cond399:Nitrogen_Depletion_8_h\n Cond798:Ca30'\n Pho85.pho85:Chemical inhibition of the Pho85 cyclin-dependent kinase rev\neals a role in the environmental stress response.  Proc Natl\n Acad Sci U S A. 2001 Oct 23;98(22):12578-83.\n Cond950:TPK1_MT1val\n Cell Cycle.alpha:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion.  Mol Biol Cell. 1998 Dec;9(12):3273-97.\n GCR1.gcr1:Understanding the growth phenotype of the yeast gcr1 mutant \nin terms of global genomic expression patterns.  J Bacteriol\n. 2000 Sep;182(17):4970-8.\n mMUP1:high affinity methionine permease,high affinity methionine p\nermease,Null mutant is viable but cannot perform high-affini\nty methionine update.\n Cond400:Nitrogen_Depletion_12_h\n Cond870:yhe710-30\n Cond573:cdc15_80\n Stress.Carbon:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond955:TPK3_MT1val\n Stress.WeakCold:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond409:diauxic_shift_timecourse_15.5_h\n Cond802:CaFK30'\n Cond696:gal1-gal\n Cond391:aa_starv_1_h\n COMP.:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond805:Ca/Ca+FK30'\n Cond393:aa_starv_4_h\n Mating.Mating:Signaling and circuitry of multiple MAPK pathways revealed b\ny a matrix of global gene expression profiles.  Science. 200\n0 Feb 4;287(5454):873-80\n Stress.aa_starv:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond966:swi1,_YPD_(a)\n Cond624:DY1457_(wild_type)_3_mM_vs._10_uM_zinc_y13-75\n Cond553:alpha14\n Cond404:Nitrogen_Depletion_5_d\n TorRama.Series0:Partitioning the transcriptional program induced by rapamyci\nn among the effectors of the Tor proteins. Curr Biol. 2000 D\nec 14-28;10(24):1574-81\n mTAT1:Amino acid transport protein for valine, leucine, isoleucine\n, and tyrosine,amino acid transport protein for valine, leuc\nine, isoleucine, and tyrosine,\n Cond749: Cond915:(99i4)_HBY4_YPGL_NormInt\n Cond852:30_min\n Cond452:sucrose_vs._reference_pool_car-1\n Cond807:crz1/Ca30'\n Cond851:15_min\n Cond65:fus3(haploid)\n Cond936:12h\n tcl1.tcl1:The genome-wide expression response to telomerase deletion i\nn Saccharomyces cerevisiae.  Proc Natl Acad Sci U S A. 2002 \nJul 9;99(14):9316-21.\n Cond700:gal5-gal\n Cond484:Low-Pi_vs_High-Pi_in_WT_(NBW7)_exp2\n Cond145:rts1\n Cond963:t11.5_g/r_ratio\n Cond949:WT1val\n Cond734: Cond854:120_min_\n Cond542:fus3Dtec1D+50nMaF,30min/wtlog10(intensity)\n Cond26:cka2\n gala.-gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Cond328:33C_vs._30C_-_90_minutes\n SGD.GO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond687:gal1+gal\n Cond951:WT2val\n Cond394:aa_starv_6_h\n Cond781:Peroxide_20'\n Cond959:t2_g/r_ratio\n Calcin.Ca/Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond969:swi1,_minimal_(a)\n Stress.ColdShock:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond965:ndt80_delete_mid_g/r_ratio_\n Cond206:yel044w\n Cond952:TPK1_MT2val\n Calcin.crz1:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond828:tlc1_Expt.1_Passage_9\n Cond659:DES460_(wt)_-_mock_irradiation_-_30_min\n Cond970:swi1,_minimal_(c)\n Cond627:DY1457_(wild_type)_3_mM_vs._76_nM_zinc_y12-122\n Cond695:gal80+gal\n Cond853:60_min\n Calcin.Ca:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Cond510:fus3Dą50nMaF,30minlog10(intensity)\n Stress.dshift:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond423:YPD_stationary_phase_4_h_ypd-1\n Cond397:Nitrogen_Depletion_2_h\n Cond368:dtt_480_min_dtt-2\n Cond448:galactose_vs._reference_pool_car-1\n Cond396:Nitrogen_Depletion_1_h\n RapamycinHap.hap_ram:Rapamycin-modulated transcription defines the subset of nutr\nient-sensitive signaling pathways directly controlled by the\n Tor proteins.  Proc Natl Acad Sci U S A. 1999 Dec 21;96(26)\n:14866-70.\n Calcin.CaFK:Genome-wide analysis of gene expression regulated by the cal\ncineurin/Crz1p signaling pathway in Saccharomyces cerevisiae\n.  J Biol Chem. 2002 Aug 23;277(34):31079-88\n Meiosis.Series0:The core meiotic transcriptome in budding yeasts.  Nat Genet\n. 2000 Dec;26(4):415-23.\n Cond954:TPK2_MT2val\n TPK.TPK:The yeast A kinases differentially regulate iron uptake and \nrespiratory function.  Proc Natl Acad Sci U S A. 2000 May 23\n;97(11):5984-8.\n Cond190:vps8\n Cond99:med2(haploid)\n Cond140:rps24a(**9)\n Cond112:pep12\n Stress.YPDStat:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond967:swi1,_YPD_(c)\n GCN4.gcn4:Transcriptional profiling shows that Gcn4p is a master regul\nator of gene expression during amino acid starvation in yeas\nt.  Mol Cell Biol. 2001 Jul;21(13):4347-68.\n Stress.DTT2:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond956:TPK3_MT2val\n Cond753: Cond934:8h\n Cond566:alpha105\n Cond705:gal1gal10+gal\n Cond489:PHO81c_vs_WT_exp1\n Cond935:10h\n Stress.NitroDepl:Genomic expression programs in the response of yeast cells t\no environmental changes.  Mol Biol Cell. 2000 Dec;11(12):424\n1-57\n Cond450:mannose_vs._reference_pool__car-1\n mGNP1:high-affinity glutamine permease,high affinity glutamine per\nmease,Null mutant is viable but shows reduced glutamine tran\nsport and is therefore resistant to the glutamine analog L-g\nlutamic acid gamma-monohydroxamate; overexpression induces s\nensitivity to heat shock\n Cond144:rtg1\n SwiSnf.swisnf:Whole-genome expression analysis of snf/swi mutants of Sacch\naromyces cerevisiae.  Proc Natl Acad Sci U S A. 2000 Mar 28;\n97(7):3364-9.\n Cond17:bub1(haploid**2,10)\n Cond869:yhe711-30\n COMP.KO:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n gala.+gal:Integrated genomic and proteomic analyses of a systematicall\ny perturbed metabolic network.  Science. 2001 May 4;292(5518\n):929-34.\n Sporulation.Series0:The transcriptional program of sporulation in budding yeast.\n  Science. 1998 Oct 23;282(5389):699-705.\n Cond838:expt1\n Cond806:crz1/Ca15'\n Cond403:Nitrogen_Depletion_3_d\n Cond250:ymr031w-a\n Cond319:37C_to_25C_shock_-_90_min\n Cond182:tup1(haploid)\n Cond850:0_min\n Cond686:wt+gal\n Cond402:Nitrogen_Depletion_2_d\n Cond554:alpha21\n Cond398:Nitrogen_Depletion_4_h\n Cond401:Nitrogen_Depletion_1_d\n pho.Pho:New components of a system for phosphate accumulation and po\nlyphosphate metabolism in Saccharomyces cerevisiae revealed \nby genomic expression analysis.  Mol Biol Cell. 2000 Dec;11(\n12):4309-21.\n mBAP2:contains 12 predicted transmembrane domains,amino acid perme\nase for leucine, valine, and isoleucine (putative),reduced u\nptake of leucine, isoleucine, and valine\n Cond474:gcn4D+/-100mM3AT(KNY124)\n Cond538:fus3D/wtlog10(intensity)\n Cond868:ts19-ss\n zap1.Series0:Genome-wide characterization of the Zap1p zinc-responsive re\ngulon in yeast.  Proc Natl Acad Sci U S A. 2000 Jul 5;97(14)\n:7957-62.\n Cell Cycle.cdc15:Comprehensive identification of cell cycle-regulated genes o\nf the yeast Saccharomyces cerevisiae by microarray hybridiza\ntion.  Mol Biol Cell. 1998 Dec;9(12):3273-97.\n COMP.TE:Functional classification via a compendium of knockouts. Hug\nes et.al., cell 2000.\n Cond938:2h\n Cond392:aa_starv_2_h\n Y-Stre.Peroxide:Remodeling of yeast genome expression in response to environ\nmental changes.  Mol Biol Cell. 2001 Feb;12(2):323-37.\n Cond979:WT_10_mM_1NaPP1\n Cond514:GAL-STE12,3hrs.gallog10(intensity)\n Cond577:cdc15_120\n Cond428:YPD_stationary_phase_3_d_ypd-1\n fkh1,2sf.Series0:Two yeast forkhead genes regulate the cell cycle and pseudoh\nyphal growth.  Nature. 2000 Jul 6;406(6791):90-4.\n Cond953:TPK2_MT1val\n

this is an automaticly generated GENESYS report
Computational Genomics Lab, Tel-Aviv uniresity