@MODEL
Yeast_Hog2.model

@AUTHOR
irit

@SPECIES
4932

@VARIABLE
0	OsmoStress	other	3	334	54		
1	CTT1	mRNA	3	420	140	YGR088W	
2	HOG1	activeProtein	3	334	99	YLR113W	
3	STL1	mRNA	3	270	162	YDR536W	
4	TEC1	mRNA	3	335	161	YBR083W	

@VARIABLE_ATTRIB
0	in_logic	0
0	n_regulators	0
0	confidence	0.01
1	in_logic	3
1	n_regulators	2
1	regulator0	2
1	regulator1	0
1	confidence	0.01
1	description	Cytosolic catalase T, has a role in protection from oxidative damage by hydrogen peroxide
2	in_logic	1
2	n_regulators	1
2	regulator0	0
2	confidence	0.01
2	aliases	SSK3
2	description	Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors; mediates the recruitment and activation of RNA Pol II at Hot1p-dependent promoters; localization regulated by Ptp2p and Ptp3p
3	in_logic	4
3	n_regulators	1
3	regulator0	2
3	confidence	0.01
3	description	Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation, strongly but transiently induced when cells are subjected to osmotic shock
4	in_logic	2
4	n_regulators	1
4	regulator0	2
4	confidence	0.01
4	aliases	ROC1
4	description	Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, and haploid invasive and diploid pseudohyphal growth; TEA/ATTS DNA-binding domain family member

@LOGIC
0	table	0	3	-
1	table	1	3	-
2	table	1	3	-
3	min	2	3	-
4	table	1	3	-

@LOGIC_ATTRIB
0	table	1
1	table	0 1 2
1	input0	1	0	
2	table	2 1 0
2	input0	1	2	
3	input0	1	2	
3	input1	1	0	
4	table	0 1 2
4	input0	1	2	

@FEEDBACK_SET


@SUBNET
focus	0

@CONDITIONS
0	WT_CONDITION	Yeast_HOG.data	-1.0	1.0
1	WT	Yeast_HOG.data	-1.0	1.0
2	WT_0.5M	Yeast_HOG.data	-1.0	1.0
3	hog1	Yeast_HOG.data	-1.0	1.0
4	hog1_0.5M	Yeast_HOG.data	-1.0	1.0

@CONDATTRIB

@CONDDATA
0	4	0.0	
0	1	0.0	
0	2	0.0	
0	3	0.0	
1	4	0.40163043	
1	1	0.015783051	
1	2	-0.39592868	
1	3	-0.14560534	
2	4	-1.5734669	
2	1	5.44867	
2	2	-0.64837164	
2	3	4.554773	
3	4	0.75360453	
3	1	0.062121753	
3	2	-3.2243173	
3	3	0.32538643	
4	4	1.6359866	
4	1	3.208049	
4	2	-4.035047	
4	3	-0.40927818	

@INFERENCE_PARAMETERS
METHOD	LBP
GIBBS_N	100
GIBBS_T	1000
MI_GIBBS	0
MODE_COUNT	3
CV	0


@INFERENCE_CONDITIONS
1	
2	
0	
3	
4	

@INFERENCE_OBSERVED
1	1	
1	2	
1	3	
1	4	
2	1	
2	2	
2	3	
2	4	
0	1	
0	2	
0	3	
0	4	
3	1	
3	2	
3	3	
3	4	
4	1	
4	2	
4	3	
4	4	

@INFERENCE_INFERED
1	1	
1	2	
1	0	
1	3	
1	4	
2	1	
2	2	
2	0	
2	3	
2	4	
0	1	
0	2	
0	0	
0	3	
0	4	
3	1	
3	2	
3	0	
3	3	
3	4	
4	1	
4	2	
4	0	
4	3	
4	4