Expander 5.2 Manual

• Introduction
• Starting EXPANDER
• Input Data
• Preprocessing GE Data
• Viewing Data Plots
• Differential Expression Analysis
• Defining a group according to a rule
• Defining a group according to similarity to a selected probe
• Clustering GE Data
• Biclustering GE Data
• Network Based Grouping of GE Data
• Group Analysis Tools
• Matrix Visualizations
• Hierarchical Clustering and Visualization
• PCA Transformation
• Analysis Wizard
• Additional Options
• File Formats
• Sample Input Files
• Supplied Files
• Settings
• R External Application
• FAQ
• Copyrights Information
• References