Benchmark | Organism | Target-set size | Promoter length | Correct motif | Program | Success | Time (secs.) | Top 4 motifs (two for length 8 and two for length 10) | |||
CREB_Zhang | Human | 2338 | 1201 | M00039, M00113, M00177, M00178, M00916, M00917 (Transfac) | MEME | No | did not finish | ||||
AlignACE | No | did not finish | |||||||||
YMF | No | 9719 | ![]() |
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Amadeus | Yes | 797 | ![]() |
![]() CREB[M00039] 0.1172 CREB[M00178] 0.132 CREB[M00917] 0.1383 CREB[M00916] 0.1495 CREB[M00177] 0.156 |
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![]() CREB[M00178] 0.1272 CREB[M00917] 0.158 CREB[M00916] 0.1581 CREB[M00177] 0.1624 CREB[M00113] 0.19 |
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Weeder | Yes | 50984 | ![]() |
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Trawler | No | 224 | |||||||||
E2F4_Cam | Human | 201 | 1201 | M00050, M00516, M00919, M00920, M00938, M00940, M01114 (Transfac) | MEME | No | 3008 | ![]() |
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AlignACE | No | 7726 | ![]() |
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YMF | No | 1478 | ![]() |
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Amadeus | Yes | 606 | ![]() E2F[M00920] 0.1356 E2F-1[M00938] 0.14 E2F[M00919] 0.1466 E2F-1[M00940] 0.1509 E2F[M00050] 0.1755 E2F[M01114] 0.2164 |
![]() |
![]() E2F[M00919] 0.1374 E2F[M00516] 0.1378 E2F[M00050] 0.1579 E2F-1[M00940] 0.1617 E2F[M01114] 0.2046 E2F-1[M00938] 0.2158 |
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Weeder | Yes | 4048 | ![]() E2F-1[M00940] 0.1175 E2F[M00919] 0.1441 E2F[M00516] 0.1465 E2F-1[M00938] 0.1519 E2F[M01114] 0.1574 E2F[M00920] 0.1647 |
![]() E2F[M00516] 0.1415 E2F-1[M00938] 0.1898 E2F[M00920] 0.192 E2F[M00919] 0.2026 E2F-1[M00940] 0.2162 E2F[M01114] 0.2307 |
![]() E2F[M00516] 0.1683 E2F[M01114] 0.192 E2F-1[M00940] 0.192 E2F[M00919] 0.2267 E2F[M00920] 0.2357 |
![]() E2F[M00516] 0.1464 E2F[M00920] 0.1917 E2F[M00919] 0.2008 E2F-1[M00938] 0.2141 E2F-1[M00940] 0.218 |
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Trawler | Yes | 903 | ![]() E2F[M00516] 0.1075 E2F[M00920] 0.1187 E2F[M00919] 0.1307 E2F-1[M00940] 0.1355 E2F-1[M00938] 0.1496 E2F[M01114] 0.1763 |
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E2F_Ren | Human | 79 | 1201 | M00050, M00516, M00919, M00920, M00938, M00940, M01114 (Transfac) | MEME | No | 454 | ![]() |
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AlignACE | No | 991 | ![]() |
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YMF | No | 987 | ![]() |
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Amadeus | Yes | 569 | ![]() E2F-1[M00940] 0.083 E2F[M00516] 0.1115 E2F[M00920] 0.1348 E2F[M00919] 0.1351 E2F[M01114] 0.1514 E2F-1[M00938] 0.1704 |
![]() |
![]() E2F[M00516] 0.1215 E2F-1[M00940] 0.1245 E2F[M00920] 0.1314 E2F[M00919] 0.1401 E2F-1[M00938] 0.1593 E2F[M01114] 0.1806 |
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|||||
Weeder | Yes | 1652 | ![]() E2F-1[M00940] 0.1103 E2F[M00516] 0.1181 E2F[M01114] 0.1292 E2F[M00919] 0.1403 E2F-1[M00938] 0.1504 E2F[M00920] 0.1505 |
![]() E2F-1[M00940] 0.1579 E2F[M00516] 0.1728 E2F[M00919] 0.1763 E2F[M01114] 0.1902 E2F[M00920] 0.1929 E2F-1[M00938] 0.2027 |
![]() E2F[M00919] 0.1759 E2F[M00516] 0.1768 E2F[M00920] 0.183 E2F[M01114] 0.1931 E2F[M00050] 0.2056 E2F-1[M00938] 0.2296 |
![]() E2F[M00919] 0.2308 E2F-1[M00940] 0.2371 |
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Trawler | Yes | 505 | ![]() |
![]() E2F[M00920] 0.175 E2F[M00516] 0.1827 E2F-1[M00938] 0.1842 E2F[M01114] 0.1957 E2F-1[M00940] 0.2013 |
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ERa_Kwon | Human | 496 | 1201 | M00191, M00511, M00959 (Transfac) | MEME | No | 22576 | ![]() |
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AlignACE | No | 55504 | ![]() |
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|||||
YMF | No | 3211 | ![]() |
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|||||
Amadeus | No | 602 | ![]() |
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|||||
Weeder | No | 9515 | ![]() |
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Trawler | No | 787 | ![]() |
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ETS1_Hollenhorst | Human | 1192 | 1201 | M00032, M00074, M00339, M00743, M00771, M00971, M01078 (Transfac) | MEME | No | 142233 | ![]() |
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AlignACE | No | did not finish | |||||||||
YMF | Yes | 5608 | ![]() |
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|||||
Amadeus | Yes | 634 | ![]() |
![]() |
![]() Ets[M00971] 0.1722 ETS[M00771] 0.1925 c-Ets-1(p54)[M00032] 0.1943 c-Ets-1(p54)[M00074] 0.2073 c-Ets-1[M00339] 0.2082 |
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|||||
Weeder | Yes | 25568 | ![]() c-Ets-1(p54)[M00032] 0.1599 c-Ets-1[M01078] 0.1662 ETS[M00771] 0.1976 c-Ets-1[M00339] 0.2106 Ets[M00971] 0.2107 c-Ets-1(p54)[M00074] 0.2197 |
![]() c-Ets-1(p54)[M00032] 0.2057 Ets[M00971] 0.2106 c-Ets-1[M01078] 0.2365 |
![]() c-Ets-1[M01078] 0.1804 c-Ets-1(p54)[M00032] 0.1851 Ets[M00971] 0.1898 ETS[M00771] 0.2196 c-Ets-1[M00339] 0.2309 c-Ets-1(p54)[M00074] 0.2331 |
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|||||
Trawler | No | 952 | |||||||||
Foxp3_Marson | Mouse | 1060 | 1201 | M00992 (Transfac) | MEME | No | 107530 | ![]() |
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AlignACE | No | 243474 | ![]() |
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YMF | No | 6612 | ![]() |
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Amadeus | No | 924 | ![]() |
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|||||
Weeder | No | 20024 | ![]() |
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Trawler | No | 1022 | ![]() |
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GATA_Pauli | Elegans | 1342 | 1201 | M00075, M00076, M00077, M00126, M00127, M00128, M00203, M00346, M00347, M00348, M00349, M00350, M00351, M00462, M00632, M00789 (Transfac) | MEME | No | 174931 | ![]() |
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AlignACE | No | did not finish | |||||||||
YMF | Yes | 9120 | ![]() GATA-1[M00347] 0.1834 GATA-X[M00203] 0.1958 GATA-1[M00346] 0.1977 GATA-1[M00128] 0.2056 [M00789] 0.2269 GATA-1[M00126] 0.2356 |
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|||||
Amadeus | Yes | 720 | ![]() GATA-1[M00346] 0.1729 GATA-1[M00347] 0.1857 GATA-X[M00203] 0.1977 GATA-1[M00128] 0.2104 [M00789] 0.2131 GATA-3[M00350] 0.2136 |
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![]() GATA-2[M00348] 0.1719 [M00789] 0.1833 GATA-1[M00347] 0.1941 GATA-1[M00346] 0.2194 GATA-1[M00126] 0.237 GATA-3[M00350] 0.2386 GATA-1[M00128] 0.2391 |
![]() GATA-X[M00203] 0.2095 |
|||||
Weeder | No | 25075 | ![]() |
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|||||||
Trawler | No | 1199 | |||||||||
HCC-G1S_Whitfield | Human | 266 | 1201 | M00050, M00516, M00919, M00920, M00938, M00940, M01114 (Transfac) | MEME | No | 5955 | ![]() |
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AlignACE | No | 16223 | ![]() |
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|||||
YMF | No | 2048 | ![]() |
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|||||
Amadeus | Yes | 768 | ![]() E2F[M00050] 0.1427 E2F[M00516] 0.1625 E2F-1[M00940] 0.1631 E2F[M00919] 0.1803 E2F[M00920] 0.1922 E2F-1[M00938] 0.2163 |
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![]() E2F[M00516] 0.1303 E2F-1[M00938] 0.1441 E2F[M00919] 0.1502 E2F[M00920] 0.1602 E2F-1[M00940] 0.2109 |
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|||||
Weeder | Yes | 5108 | ![]() E2F[M00050] 0.1215 E2F[M00516] 0.1441 E2F[M00919] 0.155 E2F[M01114] 0.1572 E2F-1[M00938] 0.1579 E2F[M00920] 0.1622 |
![]() E2F[M00050] 0.2008 E2F[M00920] 0.2205 E2F-1[M00940] 0.2257 E2F[M00919] 0.2298 |
![]() E2F[M00516] 0.1599 E2F[M00920] 0.1633 E2F[M00919] 0.1702 E2F-1[M00940] 0.1774 E2F-1[M00938] 0.1795 E2F[M01114] 0.2341 |
![]() E2F[M00050] 0.1296 E2F-1[M00940] 0.1705 E2F[M00919] 0.1825 E2F[M00920] 0.1862 E2F-1[M00938] 0.2281 |
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Trawler | Yes | 1254 | ![]() |
![]() E2F[M00516] 0.0922 E2F[M00919] 0.0997 E2F[M00920] 0.112 E2F-1[M00940] 0.1259 E2F[M01114] 0.1445 E2F-1[M00938] 0.1654 |
![]() E2F[M00516] 0.1677 E2F-1[M00940] 0.1681 E2F[M00919] 0.1881 E2F-1[M00938] 0.2022 E2F[M01114] 0.2046 E2F[M00920] 0.2061 |
![]() E2F[M00516] 0.2077 E2F[M00050] 0.2208 E2F-1[M00940] 0.2349 E2F[M00920] 0.237 |
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HCC-G2M_Whitfield | Human | 344 | 1201 | M00185, M00287, M00775 (Transfac) | MEME | No | 10631 | ![]() |
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AlignACE | No | 28319 | ![]() |
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YMF | No | 2506 | ![]() |
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Amadeus | Yes | 731 | ![]() |
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![]() NF-Y[M00287] 0.1653 NF-Y[M00185] 0.2234 |
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Weeder | No | 6642 | ![]() |
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Trawler | No | 1506 | ![]() |
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HNF1a_Odom | Human | 206 | 1201 | M00132, M00206, M00790, M01011 (Transfac) | MEME | No | 3141 | ![]() |
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AlignACE | Yes | 9483 | ![]() |
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YMF | No | 1669 | ![]() |
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Amadeus | Yes | 643 | ![]() HNF-1[M00132] 0.1378 HNF1[M01011] 0.1761 HNF-1[M00206] 0.2191 |
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![]() HNF-1[M00790] 0.1513 HNF1[M01011] 0.168 HNF-1[M00206] 0.1883 |
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Weeder | No | 4047 | ![]() |
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Trawler | Yes | 394 | ![]() HNF-1[M00790] 0.191 HNF1[M01011] 0.208 HNF-1[M00206] 0.2085 |
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HNF4a_Odom | Human | 1475 | 1201 | M00134, M00411, M00638, M00764, M01031 (Transfac) | MEME | No | did not finish | ||||
AlignACE | No | did not finish | |||||||||
YMF | No | 7720 | ![]() |
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Amadeus | No | 882 | ![]() |
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Weeder | No | 31799 | ![]() |
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Trawler | No | 1321 | |||||||||
HNF6_Odom | Human | 212 | 1201 | M00639 (Transfac) | MEME | No | 3357 | ![]() |
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AlignACE | No | 8898 | ![]() |
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YMF | No | 1656 | ![]() |
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Amadeus | Yes | 573 | ![]() |
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Weeder | No | 4182 | ![]() |
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Trawler | No | 516 | ![]() |
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HSF1_Page | Human | 328 | 1201 | M00146, M01023 (Transfac) | MEME | No | 9552 | ![]() |
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AlignACE | No | 24705 | ![]() |
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YMF | No | 2480 | ![]() |
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Amadeus | No | 625 | ![]() |
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Weeder | No | 6371 | ![]() |
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Trawler | No | 1261 | ![]() |
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HSF_Machin | Fly | 183 | 1201 | M00163, M00164, M00165, M00166 (Transfac) | MEME | No | 2442 | ![]() |
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AlignACE | No | 5204 | ![]() |
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YMF | No | 1630 | ![]() |
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Amadeus | No | 466 | ![]() |
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Weeder | No | 4302 | ![]() |
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Trawler | Yes | 451 | ![]() |
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![]() HSF[M00165] 0.215 |
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ImmuneResponse_GO_Hs | Human | 586 | 1201 | M00062, M00063, M00258, M00453, M00747, M00772, M00972, M00052, M00053, M00194, M00774 (Transfac) | MEME | No | 32504 | ![]() |
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AlignACE | Yes | 82457 | ![]() IRF-2[M00063] 0.1988 |
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![]() IRF1[M00747] 0.1669 IRF[M00772] 0.1807 ISRE[M00258] 0.1824 IRF-1[M00062] 0.1847 IRF-2[M00063] 0.2007 |
![]() IRF-7[M00453] 0.2162 IRF-1[M00062] 0.2337 |
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YMF | Yes | 3597 | ![]() ISRE[M00258] 0.1583 IRF-1[M00062] 0.1586 IRF[M00972] 0.1714 IRF-2[M00063] 0.1842 IRF[M00772] 0.1986 |
![]() IRF[M00772] 0.2068 IRF[M00972] 0.2247 |
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Amadeus | Yes | 737 | ![]() c-Rel[M00053] 0.2301 |
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![]() c-Rel[M00053] 0.219 |
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Weeder | No | 10786 | |||||||||
Trawler | No | 1594 | ![]() |
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ImmuneResponse_GO_Mm | Mouse | 329 | 1201 | M00062, M00063, M00258, M00453, M00747, M00772, M00972, M00052, M00053, M00194, M00774 (Transfac) | MEME | No | 10668 | ![]() |
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AlignACE | Yes | 20605 | ![]() |
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![]() IRF1[M00747] 0.1498 IRF[M00772] 0.1591 ISRE[M00258] 0.163 IRF-1[M00062] 0.2136 IRF-7[M00453] 0.2155 IRF-2[M00063] 0.2178 |
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YMF | Yes | 2572 | ![]() |
![]() IRF-2[M00063] 0.1786 ISRE[M00258] 0.2064 IRF-1[M00062] 0.2144 IRF[M00972] 0.2255 |
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Amadeus | Yes | 660 | ![]() NF-kappaB[M00052] 0.1963 NF-kappaB[M00774] 0.2086 |
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![]() IRF1[M00747] 0.1944 IRF[M00772] 0.1969 ISRE[M00258] 0.2137 IRF-1[M00062] 0.2353 IRF-2[M00063] 0.2372 |
![]() NF-kappaB[M00194] 0.2357 |
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Weeder | No | 6071 | |||||||||
Trawler | No | 814 | ![]() |
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MEF2_Blais | Mouse | 25 | 1201 | M00006, M00231, M00232, M00233, M00405, M00406, M00941 (Transfac) | MEME | No | 61 | ![]() |
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AlignACE | No | 111 | ![]() |
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YMF | No | 774 | ![]() |
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Amadeus | No | 567 | ![]() |
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Weeder | No | 525 | ![]() |
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Trawler | No | 251 | ![]() |
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MEF2_Sandmann | Fly | 208 | 1201 | M00006, M00231, M00232, M00233, M00405, M00406, M00941 (Transfac) | MEME | No | 3333 | ![]() |
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AlignACE | No | 6075 | ![]() |
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YMF | No | 1833 | ![]() |
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Amadeus | No | 533 | ![]() |
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Weeder | No | 4890 | ![]() |
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Trawler | No | 699 | ![]() |
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MSL1_Legube | Fly | 116 | 1201 | M00488 (Transfac) | MEME | Yes | 925 | ![]() |
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AlignACE | No | 1960 | ![]() |
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|||||
YMF | Yes | 1324 | ![]() |
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Amadeus | Yes | 413 | ![]() |
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Weeder | No | 2653 | ![]() |
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Trawler | Yes | 350 | ![]() |
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Myc_Oryan | Fly | 714 | 1201 | M00118, M00119, M00123, M00322, M00615, M00799, M01034 (Transfac) | MEME | No | 51069 | ![]() |
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AlignACE | Yes | 78419 | ![]() |
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|||||
YMF | No | 4133 | ![]() |
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|||||
Amadeus | Yes | 506 | ![]() |
![]() c-Myc:Max[M00123] 0.2085 c-Myc:Max[M00322] 0.2195 |
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![]() c-Myc:Max[M00615] 0.2263 Max[M00119] 0.2398 |
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Weeder | No | 17511 | ![]() |
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Trawler | No | 1392 | ![]() |
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MyoD_Blais | Mouse | 102 | 1201 | M00001, M00184, M00929 (Transfac) | MEME | No | 711 | ![]() |
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AlignACE | Yes | 1831 | ![]() |
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|||||
YMF | No | 1224 | ![]() |
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|||||
Amadeus | Yes | 557 | ![]() MyoD[M00184] 0.1998 MyoD[M00929] 0.2103 |
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![]() MyoD[M00929] 0.1593 MyoD[M00001] 0.1956 |
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|||||
Weeder | Yes | 2045 | ![]() |
![]() MyoD[M00001] 0.2209 |
![]() MyoD[M00001] 0.1771 MyoD[M00184] 0.1777 |
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|||||
Trawler | Yes | 245 | ![]() |
![]() MyoD[M00184] 0.1925 MyoD[M00001] 0.2388 |
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MyoD_Cao | Mouse | 102 | 1201 | M00001, M00184, M00929 (Transfac) | MEME | No | 713 | ![]() |
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AlignACE | Yes | 1973 | ![]() |
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|||||
YMF | No | 1263 | ![]() |
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|||||
Amadeus | Yes | 570 | ![]() MyoD[M00929] 0.1546 MyoD[M00001] 0.1576 |
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![]() MyoD[M00001] 0.2045 MyoD[M00929] 0.2127 |
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|||||
Weeder | Yes | 2069 | ![]() MyoD[M00929] 0.1976 MyoD[M00001] 0.2004 |
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![]() MyoD[M00184] 0.205 MyoD[M00001] 0.2355 |
![]() MyoD[M00001] 0.1854 MyoD[M00929] 0.2167 |
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Trawler | Yes | 280 | ![]() MyoD[M00929] 0.2146 |
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MyoG_Cao | Mouse | 78 | 1201 | M00712 (Transfac) | MEME | No | 443 | ![]() |
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AlignACE | No | 1049 | ![]() |
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|||||
YMF | No | 1080 | ![]() |
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|||||
Amadeus | Yes | 561 | ![]() |
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|||||
Weeder | Yes | 1626 | ![]() |
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Trawler | Yes | 224 | ![]() |
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Myogenin_Blais | Mouse | 106 | 1201 | M00712 (Transfac) | MEME | No | 768 | ![]() |
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AlignACE | No | 1890 | ![]() |
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YMF | No | 1220 | ![]() |
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Amadeus | Yes | 597 | ![]() |
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Weeder | Yes | 2189 | ![]() |
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Trawler | Yes | 360 | ![]() |
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NFkB_Schreiber | Human | 270 | 1201 | M00052, M00053, M00194, M00774 (Transfac) | MEME | No | 6000 | ![]() |
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AlignACE | No | 16432 | ![]() |
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YMF | No | 2091 | ![]() |
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Amadeus | Yes | 631 | ![]() c-Rel[M00053] 0.1645 NF-kappaB[M00774] 0.1722 NF-kappaB[M00194] 0.2193 |
![]() NF-kappaB[M00774] 0.2364 |
![]() NF-kappaB[M00774] 0.1487 NF-kappaB[M00052] 0.1626 NF-kappaB[M00194] 0.1955 |
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Weeder | Yes | 5208 | ![]() |
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Trawler | Yes | 840 | ![]() |
![]() NF-kappaB[M00052] 0.1263 NF-kappaB[M00774] 0.1542 NF-kappaB[M00194] 0.174 |
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![]() NF-kappaB[M00774] 0.1371 NF-kappaB[M00194] 0.1541 c-Rel[M00053] 0.1568 |
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Nanog_Boyer | Human | 714 | 1201 | M01123 (Transfac) | MEME | No | 48155 | ![]() |
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AlignACE | No | 116195 | ![]() |
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YMF | No | 4286 | ![]() |
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Amadeus | No | 702 | ![]() |
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Weeder | No | 15147 | ![]() |
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Trawler | No | 1173 | ![]() |
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Nrf1_Cam | Human | 674 | 1201 | M00652 (Transfac) | MEME | Yes | 43467 | ![]() |
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AlignACE | Yes | 99183 | ![]() |
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YMF | Yes | 3559 | ![]() |
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Amadeus | Yes | 568 | ![]() |
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Weeder | Yes | 14046 | ![]() |
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Trawler | Yes | 1054 | ![]() |
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Oct4_Boyer | Human | 241 | 1201 | M00795, M01124, M01125 (Transfac) | MEME | No | 4559 | ![]() |
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AlignACE | No | 13084 | ![]() |
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YMF | Yes | 1931 | ![]() |
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Amadeus | Yes | 569 | ![]() |
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Weeder | No | 4863 | ![]() |
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Trawler | No | 497 | ![]() |
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SRF_Cooper | Human | 172 | 1201 | M00152, M00186, M00810, M00922, M01007 (Transfac) | MEME | No | 2053 | ![]() |
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AlignACE | No | 6178 | ![]() |
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YMF | Yes | 1552 | ![]() |
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![]() SRF[M01007] 0.161 SRF[M00810] 0.1886 SRF[M00922] 0.1979 SRF[M00186] 0.2004 |
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Amadeus | Yes | 548 | ![]() SRF[M00152] 0.2309 |
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![]() SRF[M00810] 0.1242 SRF[M00922] 0.1344 SRF[M00152] 0.1368 SRF[M00186] 0.1417 |
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Weeder | Yes | 3365 | ![]() |
![]() SRF[M00152] 0.1035 SRF[M00810] 0.1087 SRF[M00186] 0.1147 SRF[M00922] 0.1173 |
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Trawler | Yes | 463 | ![]() |
![]() SRF[M00810] 0.1615 SRF[M00922] 0.1672 SRF[M01007] 0.1684 SRF[M00186] 0.186 |
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![]() SRF[M00186] 0.1091 SRF[M00810] 0.1238 SRF[M00922] 0.1292 SRF[M01007] 0.1477 |
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Sox2_Boyer | Human | 575 | 1201 | M01014, M01125 (Transfac) | MEME | No | 31204 | ![]() |
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AlignACE | No | 74186 | ![]() |
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YMF | No | 3530 | ![]() |
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Amadeus | No | 645 | ![]() |
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Weeder | No | 13387 | ![]() |
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Trawler | No | 844 | ![]() |
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YY1_XiRen | Human | 713 | 1201 | M00059, M00069, M00793, M01035, jMA0095 (Transfac) | MEME | No | 48261 | ![]() |
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AlignACE | Yes | 108689 | ![]() YY1[M00793] 0.1303 YY1[M00069] 0.1815 YY1[M01035] 0.2142 |
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![]() YY1[M00793] 0.1356 YY1[M00069] 0.1848 YY1[M01035] 0.2201 |
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YMF | Yes | 3620 | ![]() YY1[jMA0095] 0.1418 YY1[M00793] 0.1555 YY1[M01035] 0.2057 |
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![]() YY1[M00069] 0.1997 YY1[M00793] 0.2174 |
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Amadeus | Yes | 460 | ![]() YY1[M01035] 0.1769 YY1[M00069] 0.1789 YY1[M00059] 0.2313 |
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![]() YY1[jMA0095] 0.1309 YY1[M01035] 0.1567 YY1[M00069] 0.1627 YY1[M00059] 0.2359 |
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Weeder | Yes | 14037 | ![]() |
![]() YY1[jMA0095] 0.1449 YY1[M00069] 0.1961 YY1[M01035] 0.2045 |
![]() YY1[M00793] 0.1154 YY1[M00069] 0.1666 YY1[M01035] 0.1957 |
![]() YY1[M00793] 0.1293 YY1[M00069] 0.1962 YY1[M01035] 0.2246 |
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Trawler | Yes | 1472 | ![]() YY1[jMA0095] 0.1185 YY1[M00069] 0.164 YY1[M01035] 0.1733 YY1[M00059] 0.2128 |
![]() YY1[M00793] 0.1271 YY1[M00069] 0.1574 YY1[M01035] 0.1907 YY1[M00059] 0.2366 |
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let7_Brueckner | Human | 177 | 10001 | MIMAT0000062 (miRBase) | MEME | No | 1077 | ![]() |
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AlignACE | No | 5092 | ![]() |
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YMF | No | 1897 | ![]() |
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Amadeus | No | 861 | ![]() |
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Weeder | No | 2953 | ![]() |
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Trawler | No | 607 | ![]() |
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let7_Johnson | Human | 182 | 10001 | MIMAT0000062 (miRBase) | MEME | No | 1331 | ![]() |
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AlignACE | No | 8145 | ![]() |
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YMF | No | 2142 | ![]() |
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Amadeus | Yes | 992 | ![]() |
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Weeder | Yes | 3203 | ![]() |
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Trawler | Yes | 664 | ![]() |
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miR106b_Linsley | Human | 88 | 10001 | MIMAT0000680 (miRBase) | MEME | Yes | 460 | ![]() |
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AlignACE | No | 2114 | ![]() |
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YMF | Yes | 1377 | ![]() |
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Amadeus | Yes | 739 | ![]() |
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Weeder | Yes | 1705 | ![]() |
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Trawler | Yes | 505 | ![]() |
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miR124_Lim | Human | 116 | 10001 | MIMAT0000422 (miRBase) | MEME | Yes | 598 | ![]() |
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AlignACE | No | 3101 | ![]() |
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YMF | Yes | 1607 | ![]() |
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Amadeus | Yes | 665 | ![]() |
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Weeder | Yes | 2074 | ![]() |
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Trawler | Yes | 357 | ![]() |
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miR155_Rodriguez | Mouse | 95 | 10001 | MIMAT0000165 (miRBase) | MEME | No | 322 | ![]() |
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AlignACE | No | 1311 | ![]() |
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YMF | No | 1129 | ![]() |
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Amadeus | Yes | 513 | ![]() |
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Weeder | No | 1376 | ![]() |
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Trawler | Yes | 297 | ![]() |
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miR16_Linsley | Human | 90 | 10001 | MIMAT0000069 (miRBase) | MEME | Yes | 520 | ![]() |
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AlignACE | No | 2557 | ![]() |
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YMF | No | 1534 | ![]() |
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Amadeus | Yes | 706 | ![]() |
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Weeder | Yes | 1934 | ![]() |
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Trawler | Yes | 415 | ![]() |
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miR1_Lim | Human | 65 | 10001 | MIMAT0000416 (miRBase) | MEME | Yes | 255 | ![]() |
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AlignACE | No | 1360 | ![]() |
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YMF | No | 1197 | ![]() |
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Amadeus | Yes | 673 | ![]() |
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Weeder | Yes | 1141 | ![]() |
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Trawler | Yes | 292 | ![]() |
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miR34_Chang | Human | 89 | 10001 | MIMAT0000255, MIMAT0000685, MIMAT0000686 (miRBase) | MEME | No | 379 | ![]() |
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AlignACE | No | 2118 | ![]() |
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YMF | Yes | 1390 | ![]() |
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Amadeus | No | 740 | ![]() |
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Weeder | No | 1486 | ![]() |
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Trawler | No | 330 | ![]() |
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miR34_He | Human | 367 | 10001 | MIMAT0000255, MIMAT0000685, MIMAT0000686 (miRBase) | MEME | Yes | 6415 | ![]() |
![]() hsa-miR-34c[MIMAT0000686] 0.0030 hsa-miR-34a[MIMAT0000255] 0.1274 |
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AlignACE | No | 32662 | ![]() |
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YMF | No | 3080 | ![]() |
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Amadeus | Yes | 802 | ![]() hsa-miR-34c[MIMAT0000686] 0.1295 hsa-miR-34a[MIMAT0000255] 0.1295 |
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![]() hsa-miR-34a[MIMAT0000255] 0.1188 hsa-miR-34c[MIMAT0000686] 0.1418 |
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Weeder | Yes | 7817 | ![]() hsa-miR-34c[MIMAT0000686] 0.1589 hsa-miR-34b[MIMAT0000685] 0.17 |
![]() hsa-miR-34c[MIMAT0000686] 0.1419 hsa-miR-34b[MIMAT0000685] 0.2338 |
![]() hsa-miR-34a[MIMAT0000255] 0.0626 hsa-miR-34b[MIMAT0000685] 0.0632 |
![]() hsa-miR-34c[MIMAT0000686] 0.0508 hsa-miR-34a[MIMAT0000255] 0.0508 |
|||||
Trawler | No | 800 | ![]() |
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miR373_Lim | Human | 43 | 10001 | MIMAT0000726 (miRBase) | MEME | Yes | 95 | ![]() |
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AlignACE | No | 353 | ![]() |
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YMF | Yes | 944 | ![]() |
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Amadeus | Yes | 588 | ![]() |
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|||||
Weeder | Yes | 608 | ![]() |
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Trawler | No | 238 | ![]() |
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p53_Kannan | Human | 38 | 1201 | M00034, M00272, M00761 (Transfac) | MEME | No | 122 | ![]() |
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AlignACE | No | 300 | ![]() |
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|||||
YMF | No | 852 | ![]() |
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Amadeus | No | 501 | ![]() |
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|||||
Weeder | Yes | 684 | ![]() |
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Trawler | No | 99 | ![]() |
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