Computational Genomics Research Seminar

Current meetings



2001 Schedule:

Coordinators : Itsik Pe'er and then Roded Sharan and then Amos Tanay

Date
Speaker
Title
22 Nov 00
Itsik Pe'er
A Structural EM Algorithm for Phylogenetic Inference
Dec. 6
Naftali Kaminski (Sheba Hospital)
microarray experiments produce only gene lists? Lessons from the use of oligonucleotide microarrays to analyze pulmonary fibrosis in mice and humans.
Dec. 13
Chen Kaesar (Weizmann)
Brute force minimization in an antlion(*) town: The generation of decoy sets for proteins
Dec. 20
Nati Srebro (MIT)
Maximum Weight Hypertrees and Windmill Farms

Dec. 27
Rani Elkon
Gene Expression Microarrays - Survey of Applications
Jan 10 '01
Nili Avidan (Weizmann)
Identification of the gene causing mucolipidosis type IV
Jan 17
Michal Ziv-Ukelson (Haifa)
On the Common Substring Alignment Problem
Jan 31
Michael Korostishevsky (TAU)
Reconstruction of Chromosomal Site Origin Based on Adjacent Haplotypes
Feb. 14
Gil Ast (TAU)
Conserved evolution of mRNA splicing between group II autocatalytic introns and spliceosomal introns
March 7
Gill Bejeran (HUJI)
An Information Theoretic Model for Genomic Evolution
March 14
Iftach Nachman (HUJI)
Tissue Classification with Gene Expression Profiles
April 21
Ariel Darvasi (HUJI)
Theoretical aspects of disease susceptibility gene discovery
April 28
Ron Unger (BIU)
Scaling Law in Sizes of Protein Sequence FamiliesScaling Law in Sizes of Protein Sequence Families
May 2
internal meeting
RECOMB '01 report
May 9
Jaqui Beckman
From the positional cloning of calpain 3 to SNPs: on genetic and protein diversity
May 16
Rani Elkon / Nir Orlev
The human genome project / protein interactions
May 23
-
closed meeting
May 30
Tzvika Hartman and Michal Ozery
Genome Rearrangements
June 6
Maxim Shatsky
Flexible Alignment of Protein Structures
June 13
Zohar Yakhini (Agilent)
Overabundance Analysis with Applications in Cancer Sub-classification
June 27
Adi Akavia
Analysis of Synthesis Design Problem
July 6
Ann Bergeron (Univ. du Guebec a Montreal)
Sorting by Reversals Made Simple
July 12
Dana Pe'er (HUJI)
Inferring Subnetworks from Perturbed Expression Profiles
July 18
Eran Segal (Stanford)
Rich Probabilistic Models for Gene Expression
Aug 1
Rotem Sorek
Sequences that regulate al[u]ternative splicing
Aug 8
Dana Pe'er (HUJI)
From gene expression to gene interaction
Aug 22
-
Bayesian Netowrks Day
Aug 23
Benny Chor (Technion)
Analytic Solutions for Three Taxon MLMC Trees with Variable Rates Across Sites
Oct. 31
Itsik Pe'er, Chaim Linhart, Rani Elkon
conference reports: SNP 00, Nato comp. bio. School
Nov. 14
-
closed meeting
Nov. 21
Steve Skiena (Stony Brook)
Exploiting Redundancy in the Genetic Code
Nov. 28
Amos Tanay
Inferring a set of master regulators in Molecular Networks









Ron Shamir's Computational Genomics Laboratory, Tel-Aviv University